Gene VC0395_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0336 
Symbol 
ID5134398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand- 
Start bp369113 
End bp369742 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content50% 
IMG OID640530659 
Producthypothetical protein 
Protein accessionYP_001215177 
Protein GI147671800 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3531] Predicted protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.483638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAGGG TTCACTACAT TTTTGACCCT ATGTGTGGGT GGTGCTTCGG CGCCACCTCA 
CTGATGGAAC AACTGGCACA ACAATCCCAT CTTGAACTGG TACTACACCC CGGTGGCATG 
ATGGATAAAG CACAGCTCAG TCCTGATTTT CGTGCGCATA TTTTGCAAGC CGACCAACGC 
ATTCAGCGTG AAACAGGCGC AGAGTTTGGC GAGGCGTATT TAGAGCGTGT ACGCAGTGGT 
CAACCACTCA TGCTCGATTC GTACTTCACA GCCCAAGCCA TCATTGCGGC ACGTCTTGCT 
GGCAAACGTG ATTTCGACAT GCTGAAAGCC ATTCAGCGTG CGCACTACCA GCAAGGTCTG 
GATGTGACAC AAACGGAGGT AATGCAACAG TTAGCGCAAG CGATGGGCAT TACCCCTGAA 
ACATGGCAAA ACGTGATGCC ACAAGCTGCA GCAAAAGTAC GCAGTGACAT TGCTCAAACC 
CAACGCTTAA TGCAACAGCT GGGTTTAGGT GGTTTTCCTT CGTTAGCCAT TGAGCAAAAT 
AACGAGTGGT ACACCTTAAG TCCTAGCCAC TACTATCGCC GCCCACAAGA GTGGCAAGCA 
TGGTTAGAAT CACTCAGCGT GACAGCATAA
 
Protein sequence
MVRVHYIFDP MCGWCFGATS LMEQLAQQSH LELVLHPGGM MDKAQLSPDF RAHILQADQR 
IQRETGAEFG EAYLERVRSG QPLMLDSYFT AQAIIAARLA GKRDFDMLKA IQRAHYQQGL 
DVTQTEVMQQ LAQAMGITPE TWQNVMPQAA AKVRSDIAQT QRLMQQLGLG GFPSLAIEQN 
NEWYTLSPSH YYRRPQEWQA WLESLSVTA