Gene VC0395_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0319 
Symbol 
ID5134903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand- 
Start bp352681 
End bp353280 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content49% 
IMG OID640530642 
Producthypothetical protein 
Protein accessionYP_001215160 
Protein GI147672410 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.00889609 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCTTC GTGTTATTGC CCTTTCATTG TCGCTTATCG CGGGTTGCAC ACATGCGATG 
GCTTTGGATC TCTACATGGT ACTCAACCAT CTCGACAATT ACGGTAACCT TGATCTGCGC 
GGCAAGCCCT ACACTTCCTT GCCGGAAAAC TTCACGATCA AAGGGAATTT GAATATCGCT 
AAAACTGCGA TCAAATCGCT ACCGAAAGGC ACCATCATAG AGGGCAGCTT GGATGCCTCA 
AACAGCTCGC TGGAAAAAGT ACCACGAGGC ACAAGCATCA AAGGCTACGC CAACTTACTC 
GGAACCAAAA TTCAATCGTG GCCATCCGGT GTAAAAGTGG GCGGTTATCT CAACTTTACT 
GACACGCCAT TAACCACCCT ACCAGCACGA ATGACGGTAA AAGGGGATCT CAGTGTGATC 
CGCACACCGC TCACTGACTT ACCAGAAGGC ATAGTGATTG AAGGACATCT CTTCATTGGC 
GGCTCACAAA TCACTCGCTT CCCAGACACC ATGACGGTTA AGGGCAATAT TTACTTAGGG 
GGTAACCAAA TCAGTAAATG GCCAAGCAAA CTCACACTCG GCGGCGCTGT CGCTCGCTAA
 
Protein sequence
MMLRVIALSL SLIAGCTHAM ALDLYMVLNH LDNYGNLDLR GKPYTSLPEN FTIKGNLNIA 
KTAIKSLPKG TIIEGSLDAS NSSLEKVPRG TSIKGYANLL GTKIQSWPSG VKVGGYLNFT 
DTPLTTLPAR MTVKGDLSVI RTPLTDLPEG IVIEGHLFIG GSQITRFPDT MTVKGNIYLG 
GNQISKWPSK LTLGGAVAR