| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0303 |
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| Symbol | |
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| ID | 5134737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 335907 |
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| End bp | 336698 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530625 |
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| Product | AraC/XylS family transcriptional regulator |
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| Protein accession | YP_001215143 |
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| Protein GI | 147672160 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAAAC GCACTCGACA CTTGCATCCC TCATTATCTA TCGAGCATCC ACCTTCGGAT
GTTTTTATGA ATTTTGAAGC GTTTCTGTCC AATACAGAAA CTCGTGAGCA CAGCCACCCT
TGGGGGCAAG TACAGCTCAT TTCTGGCGGA ATTTTGGAGA TGGAAGCGGA AGATACGCGC
TTTTTGGCTC CGCCCCATTT GGCGATTTGG GTTCCGGCGG GGATTCGTCA TCGAAGCTAC
AACCGCAAGC CCATCGAATA CTGTTCACTG AATATTGCTT CGCAACTGAC CACGGCATTT
CCCGCTAAAA CCAGTTTAAT TAAGGTGACA TCGATTGTTT CGGCGATCAT TGATGACTTT
CGAGAACGAA ACATCAATGT GGCGCAGAGC AGTGAAGATA AGCGCTTAGT GCAAGTGTTG
CTGGATCAAC TGGCCACTCG TGAAACTCAG CACCATTTTC TTCCTTCAAC CAATCACAAA
TATTTAGCGC CGATTTTGGC TTTTGTGGAA GAGAACCCCA CCGATAACAC AACCTTGCAG
CAGTGGGCGG AAAAAGTGCA TACCACGGAG CGAACACTGG CGCGCCATTG TCAGGCTGAA
CTGGGGATGA GCTTTACCGA ATGGCGGCTG CGGGTGCGCT ATCTCTATTC GATGGAATTG
TTACGTCAAG GGCATGCAGT GAAAGAGGTG GCGTTAACCT TGGGCTATAA CCAAGCCAGC
CCGTTTATCA CCATGTTCAA AAAGTACTCC GGGTTAACCC CGGAGCAGTA TAAAAGCCGA
TTACTCGCCT AG
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| Protein sequence | MKKRTRHLHP SLSIEHPPSD VFMNFEAFLS NTETREHSHP WGQVQLISGG ILEMEAEDTR
FLAPPHLAIW VPAGIRHRSY NRKPIEYCSL NIASQLTTAF PAKTSLIKVT SIVSAIIDDF
RERNINVAQS SEDKRLVQVL LDQLATRETQ HHFLPSTNHK YLAPILAFVE ENPTDNTTLQ
QWAEKVHTTE RTLARHCQAE LGMSFTEWRL RVRYLYSMEL LRQGHAVKEV ALTLGYNQAS
PFITMFKKYS GLTPEQYKSR LLA
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