Gene VC0395_0285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0285 
Symbol 
ID5134115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp320981 
End bp321901 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content47% 
IMG OID640530608 
Productputative chemotaxis protein CheV 
Protein accessionYP_001215126 
Protein GI147671657 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein
[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.116334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAG TCGTCAGTAA AGCGAACCAA TCACAAGGAA TGTTGATGTT CACGCTCAGT 
GCCCAGCAGC AACTTTTCGC TATCGGGACA CTGAAAGTCC GGGAAATTGT GACTTATCAA
CCAATGACTC AGATCCCCTA TTCACATCAT CATGTGATAG GAACGGTTAC TATTCGTAAT
CTTACAGTGC CAGTGATTGA TATGGCCGCA GCGATTGGCT TTCGTCCAAT CCAACCGAGC
GAGTATCAGA AGTGCTATTT GATCGTCACA GACTGCTTAC GCACGGTTGT GGCTTTCATG
GTTCGCACTA TAGAGAAAAT CATCGAGTGT GATTGGCGAC AAATCGAATC GTCCCCCGAG
ACGGCAGGAC ATGATGTTTT CGTCACCGGG ATCACCCGAT TCCAGAACAA AATTGTGCAG
TTGCTAGACG TGGAGTTACT GCTCTCTAAA ATCTACCCAC AATATGAATC GACCAAAGTC
CCTATGTTGA CGGATATCGA GCGTGAGCGC TTAAAACCCC TCAATATTTT GTTGGTCGAT
GACTCTTCGA TTGCGCGTAA ACAGCTCTCT GATGCGCTGG ATAGCATCAA CATTCCGTAT
CATATCTGTA AAAATGGCAG TGAGGCGTTG GATTTGATGC GTGATATGGC ACGCGATCAC
CGCGCCATCG ACATTTTAGT GAGTGATATT GAAATGCCGG GATTAGATGG TTATGAGCTG
GCATTTGAAA TGCAAAACGA TCCGCAGTTA AACCATGCTT ATTGTATTTT GCACACTTCG
CTCTCCAGTG AAATCTGTGT CGATCGTGCC CATCAAGTGG GCGCTCACGA AGCGTTGGAG
AAATTTAACG CCACCGAGTT AGTCGAAGCC ATGTTGCGTG GAGCCAAAAA GCTTCAGACG
CAGCGTTTGC AAAAATCGTG A
 
Protein sequence
MAKVVSKANQ SQGMLMFTLS AQQQLFAIGT LKVREIVTYQ PMTQIPYSHH HVIGTVTIRN 
LTVPVIDMAA AIGFRPIQPS EYQKCYLIVT DCLRTVVAFM VRTIEKIIEC DWRQIESSPE
TAGHDVFVTG ITRFQNKIVQ LLDVELLLSK IYPQYESTKV PMLTDIERER LKPLNILLVD
DSSIARKQLS DALDSINIPY HICKNGSEAL DLMRDMARDH RAIDILVSDI EMPGLDGYEL
AFEMQNDPQL NHAYCILHTS LSSEICVDRA HQVGAHEALE KFNATELVEA MLRGAKKLQT
QRLQKS