Gene VC0395_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0252 
Symbol 
ID5134848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp287100 
End bp287933 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content50% 
IMG OID640530575 
Producthypothetical protein 
Protein accessionYP_001215093 
Protein GI147671982 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATGG AATCGCAACG CCGTGATGTG TTCTATGTTT CTGACGGAAC GGCCATCACT 
TGTGAAACGT TGGGGCACGT TGTACTGGGT CAGTTTGCTG TGCAACCCAA TGAAAAAACC
TTTCCGTTTG TGGAAAGTGA CGAAAAATTG AGTGAACTGC TCAAGCAGAT CCAACGTTCT
TATCAATTGC ACGGGGTAAA ACCTTTGGTG TTTTTCTCCA TGGTGATCCC CGAAATGCGT
ACCCGTTTGC TGCAAGCGCC CGCGCATTTT TACGATGTGT TGGAGAGCAT AGTGCAGCGG
GTGAGTCTGG ATATTGAGAT GGAGCCTGCG CCTAAGTTGC AACGCTCGCG CAGTGTCGGC
AAGGACTCGG ACACCTATTT TGACCGGATC GCTGCCATTG AATACACCTT GGCACATGAT
GATGGCGTTT CGCTTAAAGA CCTCGATCGC GCAGACATCA TTTTGCTTGG CGTATCGCGC
AGCGGAAAAA CGCCCACCAG TTTGTACATG GCGATGCAGT TTGGCCTGCG CGTGGTGAAC
TACCCCTTTA TCGCCGAAGA TATGCATGCG ATGCGCCTGT TGCCTGAGTT TGAGTTTCAT
CGTCATAAAC TGTTTGGTCT TACCATCAAT GCGGAGCGTT TGACTGAAAT TCGCGAAAAC
CGCTTAGCCG GCAGCGAATA CGCCAGCAAC CAGCAGTGCC AACAGGAACT TGCCACCGTG
GAAGCGCTAT TTCGCCGAGA GGCGATTTCG TACATCAATA CGTCCTCTTT GTCGGTGGAG
GAAATTTCCA CCCGGATCCT TGAACGAACA GGCTTAAAAC GTCGTTTATT CTAA
 
Protein sequence
MQMESQRRDV FYVSDGTAIT CETLGHVVLG QFAVQPNEKT FPFVESDEKL SELLKQIQRS 
YQLHGVKPLV FFSMVIPEMR TRLLQAPAHF YDVLESIVQR VSLDIEMEPA PKLQRSRSVG
KDSDTYFDRI AAIEYTLAHD DGVSLKDLDR ADIILLGVSR SGKTPTSLYM AMQFGLRVVN
YPFIAEDMHA MRLLPEFEFH RHKLFGLTIN AERLTEIREN RLAGSEYASN QQCQQELATV
EALFRREAIS YINTSSLSVE EISTRILERT GLKRRLF