Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0252 |
Symbol | |
ID | 5134848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 287100 |
End bp | 287933 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640530575 |
Product | hypothetical protein |
Protein accession | YP_001215093 |
Protein GI | 147671982 |
COG category | [S] Function unknown |
COG ID | [COG1806] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATGG AATCGCAACG CCGTGATGTG TTCTATGTTT CTGACGGAAC GGCCATCACT TGTGAAACGT TGGGGCACGT TGTACTGGGT CAGTTTGCTG TGCAACCCAA TGAAAAAACC TTTCCGTTTG TGGAAAGTGA CGAAAAATTG AGTGAACTGC TCAAGCAGAT CCAACGTTCT TATCAATTGC ACGGGGTAAA ACCTTTGGTG TTTTTCTCCA TGGTGATCCC CGAAATGCGT ACCCGTTTGC TGCAAGCGCC CGCGCATTTT TACGATGTGT TGGAGAGCAT AGTGCAGCGG GTGAGTCTGG ATATTGAGAT GGAGCCTGCG CCTAAGTTGC AACGCTCGCG CAGTGTCGGC AAGGACTCGG ACACCTATTT TGACCGGATC GCTGCCATTG AATACACCTT GGCACATGAT GATGGCGTTT CGCTTAAAGA CCTCGATCGC GCAGACATCA TTTTGCTTGG CGTATCGCGC AGCGGAAAAA CGCCCACCAG TTTGTACATG GCGATGCAGT TTGGCCTGCG CGTGGTGAAC TACCCCTTTA TCGCCGAAGA TATGCATGCG ATGCGCCTGT TGCCTGAGTT TGAGTTTCAT CGTCATAAAC TGTTTGGTCT TACCATCAAT GCGGAGCGTT TGACTGAAAT TCGCGAAAAC CGCTTAGCCG GCAGCGAATA CGCCAGCAAC CAGCAGTGCC AACAGGAACT TGCCACCGTG GAAGCGCTAT TTCGCCGAGA GGCGATTTCG TACATCAATA CGTCCTCTTT GTCGGTGGAG GAAATTTCCA CCCGGATCCT TGAACGAACA GGCTTAAAAC GTCGTTTATT CTAA
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Protein sequence | MQMESQRRDV FYVSDGTAIT CETLGHVVLG QFAVQPNEKT FPFVESDEKL SELLKQIQRS YQLHGVKPLV FFSMVIPEMR TRLLQAPAHF YDVLESIVQR VSLDIEMEPA PKLQRSRSVG KDSDTYFDRI AAIEYTLAHD DGVSLKDLDR ADIILLGVSR SGKTPTSLYM AMQFGLRVVN YPFIAEDMHA MRLLPEFEFH RHKLFGLTIN AERLTEIREN RLAGSEYASN QQCQQELATV EALFRREAIS YINTSSLSVE EISTRILERT GLKRRLF
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