| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0250 |
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| Symbol | |
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| ID | 5133972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 282815 |
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| End bp | 284371 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530573 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_001215091 |
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| Protein GI | 147671485 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAATA ACCAACCTGT TACTCAAAAG GAAGTCACCT ATCCACCTCA CTTCAATCTT
CTTTCGACCA CCACTCTCAG CAGTCATATC AAATACGCCA GTAAAGAGTT TTGTGATGTC
GCCGGTTACA CGCTTGATGA GCTCGTAAAC CAACCACATA ACATGGTTCG TCACCCCGAT
ATGCCGCCTG AAGCGTTTAA AGACATGTGG GAACACCTCA AAGCGGGCAA ATCTTGGATG
GGAATGGTGA AGAATCGCTG CAAAAATGGC GACCATTATT GGGTGGATGC CTTTGCTTCA
CCGATTAAAG AAAATGGCAA GGTAGTGGAA TACCAGTCGG TTCGTTTATG TCCGAGTCGG
CAGCATGTCG ATAATGCGGA TAAGCTCTAC AAAGAGATCA AAGCAGGCAA AACACCTTGG
CAGTTAAAAA TGCCACGCAC TCGCCTATGG CAGCGTTTAG GGCTCGGTTT TATCGTAGCG
GCAGGCGTCA GTTTTGCGGC GGATCGATTC TTCGCTGGTG CAGGTTTACC ATTGATGCTT
GTGTTAACCA TCCTCATGGC CTATCAATTT ACTCGCCGCT TAGAAACCCT TTCACAAGAA
GCGCGCAAAG TCTTCGATAA CCCACTGATG GAACTGGTTT ACAACGGTCG AGTCGATGAT
TTATCTGAGA TCCAACTCGC GATGAAAATG CGCCAATCCG AACTCAATGC AGTAGTAGGT
CGTATTCAAG ATTCCAGCAT TCAAATTGGT GAGGCAGCCA AAATGTCGTC CCAAAACAGT
GCAACGACAG CAGATAATCT TGATGCTCAA ACTCGCGAGA CCGAGCAGTT AGCCACCGCG
ATCACTCAGA TGAATATCAC CGCCACTGAG ATTGCGCACA ATGCACAAGC CGCCTCGGAT
GCCACTGTCC ATGCAAAAAA TGCCGCTCGA GACGGGATGC ATGCGGTCGA GCAAACCGTC
GATGCGATAG GTGAAATGGC AAGCCAGATG AAAACTGCGT CTTCTGTGAT TGAGCAGCTC
TCTTCACAAA GTGCGATGAT TGGTCAAGTC ATGGAAGTGA TTCAGAGTAT TGCTGAGCAA
ACCAACTTGT TAGCACTGAA TGCGGCCATT GAAGCGGCGC GTGCTGGCGA TCAAGGACGC
GGTTTTGCTG TGGTTGCCGA TGAAGTTCGT AAACTCGCTC AGCGCAGCAC CGAATCGACG
AAAGAGATCC AAGAAGTCAT CACCTCAATT CAAACCAGTA CCCGCAATGC TGTAGAGACG
ATTGAGCAAG GTAATAAGCT CTCTGTATCT TGTGTAGACA ACGCACATTT ATCAGGAGAC
AAGCTGACAG CTCTACTCTC ACAAGTTTCA GATATTACGA TGCGTAATGA GCAAATCGCG
ACCGCCATCG AAGAAATGGC CAATGTAACG GAAGATATGA ACCGTAGTGT GCAATCCATC
AGCGATGTCT CAACGGAAAC TCTAGGATTA GCCGAAAACA CCCAAAATGA GTGTCGTCAA
TTGGCACACA ACCTTGCCCA GCAAACCAGC TTGGTTGCAC AGTTCCGCCG AGTATAA
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| Protein sequence | MRNNQPVTQK EVTYPPHFNL LSTTTLSSHI KYASKEFCDV AGYTLDELVN QPHNMVRHPD
MPPEAFKDMW EHLKAGKSWM GMVKNRCKNG DHYWVDAFAS PIKENGKVVE YQSVRLCPSR
QHVDNADKLY KEIKAGKTPW QLKMPRTRLW QRLGLGFIVA AGVSFAADRF FAGAGLPLML
VLTILMAYQF TRRLETLSQE ARKVFDNPLM ELVYNGRVDD LSEIQLAMKM RQSELNAVVG
RIQDSSIQIG EAAKMSSQNS ATTADNLDAQ TRETEQLATA ITQMNITATE IAHNAQAASD
ATVHAKNAAR DGMHAVEQTV DAIGEMASQM KTASSVIEQL SSQSAMIGQV MEVIQSIAEQ
TNLLALNAAI EAARAGDQGR GFAVVADEVR KLAQRSTEST KEIQEVITSI QTSTRNAVET
IEQGNKLSVS CVDNAHLSGD KLTALLSQVS DITMRNEQIA TAIEEMANVT EDMNRSVQSI
SDVSTETLGL AENTQNECRQ LAHNLAQQTS LVAQFRRV
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