| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0248 |
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| Symbol | |
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| ID | 5134117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 279758 |
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| End bp | 281044 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530571 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | YP_001215089 |
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| Protein GI | 147672130 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATAAAGT CCACGCCTGC GATAATTCGC CCCACATTGT TTTTTGAATA TTCAGGTATC
CAACCCATGT CATTTTCTTC TCTCGCGTTA AGCGCCGATC TAATCCAAGC TCTGCCTAAA
GCGATCACCG AGCCCACCGC TATTCAAACT TTGGTGATCC CAGCCATGTT AACGGGCAAA
GATGTGTTGG CGTTGGCGAA TACGGGAAGT GGTAAAACCT TGGCTTACGG TCTGCCTCTG
CTTGAACGTT TAAAAACTAG CCCTGAGCAG CAAGCCTTAG TGTTGGTACC CACGCGTGAA
TTAGCCATGC AAGTGAGCGA AGTGCTCACT CAGGTTGGTA CGCCGTTAGG ACTGAACACG
CTCTGCTTGT GCGGTGGGGT AGATAAGACT GAGCAGCAAA ATGCGCTGGC TGAGAACCCG
AATATTCTGG TGGCAACCAC GGGGCGTTTG TTCGATTTAA CCCAAAGTGG ATTGAGGTTG
AACCGCGTAA CGACGTTGGT GTTAGACGAA GCCGATCGTC TGCTCGACAT GGGCTTTTGG
CCGCAAGTGC AAGCGTTAGC AAGCCAAACC GCCGGTGTGC GCCAAACCGT GATGTGTTCT
GCGACCTTCT CTGATGATTT GAAACTTAAA ACGCAGCAAT TGATGCGTGT GCCAACCCAA
GTCTCTGCTA ATCCTGAAAA CAGCATCAAC CAAGCAGTGC AAGAAACGTT GTATTTGGTG
AACAAAGGCA GTAAAACGCA AGCCTTGGTA GCCCTTTTAA AGCAGCACCA ATGGCCGCAA
GTGCTGGTGT TTATCGGCGC AAAAGAGAAT GCCGATAGTT TGACTAAAAA ACTCAACAAA
GCGGGCATAG TGGCCACTGC GCTGCATGGT GATAAAAGCC AATCGGAACG TGAAGCGGCA
CTGGCAGAAT TTAAAAACGG CTCAACCCAA GTGTTGATTG CCACCGATCT GCTCGCTCGC
GGCATTCATA TTGAGCAGCT TCCCGTTGTG ATTAACTTTG AGTTGCCGAT GCACGCAGAA
ACGTACGTGC ACCGTGTAGG CCGCACCGCC AGAGCGGGGC AGCAAGGCAT TGCGCTCTCG
TTAGTGTGTC ACGGAGAAAT GGATGCACTG AATGCGATTC GTACCCTAAC CCAACGTCAA
TTACCTGTGC AGAATCTAGA TGGTTTCCCG GTTACCGATC AGCCATCGAC CGGTGAAAGC
AAACGTGCTC CGCGTGATAA ACAGGCCAAC CGTCGCACAC AGAATAAAAA GAGCGTTAAG
CAGTTTCAGG GAAAGACGCG GACGTAA
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| Protein sequence | MIKSTPAIIR PTLFFEYSGI QPMSFSSLAL SADLIQALPK AITEPTAIQT LVIPAMLTGK
DVLALANTGS GKTLAYGLPL LERLKTSPEQ QALVLVPTRE LAMQVSEVLT QVGTPLGLNT
LCLCGGVDKT EQQNALAENP NILVATTGRL FDLTQSGLRL NRVTTLVLDE ADRLLDMGFW
PQVQALASQT AGVRQTVMCS ATFSDDLKLK TQQLMRVPTQ VSANPENSIN QAVQETLYLV
NKGSKTQALV ALLKQHQWPQ VLVFIGAKEN ADSLTKKLNK AGIVATALHG DKSQSEREAA
LAEFKNGSTQ VLIATDLLAR GIHIEQLPVV INFELPMHAE TYVHRVGRTA RAGQQGIALS
LVCHGEMDAL NAIRTLTQRQ LPVQNLDGFP VTDQPSTGES KRAPRDKQAN RRTQNKKSVK
QFQGKTRT
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