| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0242 |
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| Symbol | |
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| ID | 5134099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 273527 |
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| End bp | 275647 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530565 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_001215083 |
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| Protein GI | 147671697 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAATC ACAGTCAAAT TTGCTGGCGT TATGGGCGAC ATCGGCTGGA TTCGCTTAGA
AATAACACGC CAAGCGGATT GGCTCGCACA ACCGAAACCA AACGACGTGG TGTGGTAGCT
TCAACTCGCA AGGGTATAAC TTCAAGTCAC CAATGGATAA CGTTATACTG CTTCCGTTTT
AACAGAAAAT CACATTTTGG CGGACGCTCG CACGCGTGCT CTCTCCCTCA CTGCCGCCCT
ATCACAGCAA GGATCTTGTT CATGTTTAAG CTATTTGAAG GTTTCACTGA CCCTTTTCCC
AAAGGTGAAC CCCAACGCCC ACCCAACACT TTGTGGGCTT TTTGTCGCCA CTACACTCAC
GGTTTTGAAA AACCATTGAT CGTGATGGCG TTACTCAGTA CGGCGATCGC GATTATCGAG
GTCTCTCTGT TTGGCTTTAT GGGCCAACTG GTAGACTGGC TTTCCACCAG CTCGCCAGAC
ACCTTTTTAG TCGAGAACCA GAGCACTTTG ATTGGGTTAG GCTTATTGGT ATTGGTCGGT
ATGCCGCTAC TGATCGCCTT CTATTCACTG CTGATCCACC AATCTTTGCT CGGTAACTAC
CCGATGTCGA TCCGTTGGTT GGCGCACCGC TATCTGCTCA AGCAAAGCGT GTCGTTTTAT
CAAGACGAAT TTGCAGGGCG CATCTCAACC AAAGTGATGC AAACGGCGCT CGCGGTACGT
GAAACCGTGA TGAAAAGTCT CGATGTGTTT GTGTATGTGA TGGTTTATTT CACCGCGATT
GTAGTGATTT TGGCGCAGGC CGATTGGCGC TTAATGATCC CGATGCTGAT TTGGCTGGCG
ATTTACGTTA CGGTGCAAAT GTATTACGTG CCTAAGCTGA AAAAAGTGGC TTCCGAGCAA
GCCGATGCCC GCTCACTAAT GAGCGGCCGT ATCGTCGATA GCTACACTAA CATTATGACT
GTAAAGCTGT TTTCGCACAG TCAACGTGAA ACGCAATACG CCGAAGAAGG CATGCAAGAT
TTTCTGGGCA CCGTCCATCG CCAAATGCGT TTGGTGACTG GCTTTAATAT TTGGGTAGAA
ATGGCCAACT ACTTATTGGT GTTTACCATT GCTGCCCTAT CGATTTATCT CTGGACCACC
AGCGCCATCA GCGTCGGTGC CATTGCGGTT GCGGTCAGTT TATCCTTGTG TATCAACGGC
ATGTCTAAGT GGATCATGTG GGAAGTCAGC GCCCTGTTTG AAAACATCGG TACCGTTGTC
GATGGCATGA CCATGCTTGG CAAACCCATC ACCGTCACCG ACAAACCTGA CGCGAAACCC
TTGGTGGTTA AGCATGGTGG CATTACGTTT GATGATGTGA GCTTCCACTA CGGTGAAAAC
AAAAGCGTGA TCAACCATCT CAATCTCAAC ATTAAACCGG GTGAAAAAGT CGGTTTAGTG
GGGCGTTCGG GAGCCGGTAA ATCGACCTTG GTGAACCTAT TACTGCGTTT TCATGATGTG
GAAAGCGGCC GGATTTTAAT TGATGGTCAA CCCATTTCGG AAGTGACCCA AGAATCGCTG
CGCAGCAAAA TCGGCATGGT GACACAAGAT ACGTCACTGC TGCACCGCTC CATTCGCGAC
AACATTTTGT ATGGCAATCC GAACGCCACC GAGGAGCAGC TTTTGAAAGC GACAGCGCAA
GCCCACGCCC ATGAGTTCAT CCTCGGTTTG ACCGATCCGC ATGGCAACAG CGGTTACGAC
GCACAGGTCG GTGAACGTGG CGTCAAACTC TCTGGTGGAC AACGTCAGCG AATTGCGATC
TCTCGCGTAC TACTCAAAGA TGCGCCACTG TTGGTGCTGG ATGAAGCGAC TTCCGCACTC
GATTCCGAAG TGGAAGCCGC GATTCAAGAG AGCCTCAATG AGCTGATGCA GGGCAAAACC
GTGATTGCGA TTGCCCACCG TCTGTCGACC ATCGCGGCGA TGGATCGCCT GATCGTGCTC
GATAAAGGCC AAATTGTTGA GCAAGGCTCG CACCAAGAGT TGATTGCGCA AAACGGCATT
TATGCTCACC TGTGGGCGCA TCAAACCGGT GGCTTTATCG GCTGTGATGA AGACGAAGTA
GAAGAAGCCA TACTGGCATA A
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| Protein sequence | MVNHSQICWR YGRHRLDSLR NNTPSGLART TETKRRGVVA STRKGITSSH QWITLYCFRF
NRKSHFGGRS HACSLPHCRP ITARILFMFK LFEGFTDPFP KGEPQRPPNT LWAFCRHYTH
GFEKPLIVMA LLSTAIAIIE VSLFGFMGQL VDWLSTSSPD TFLVENQSTL IGLGLLVLVG
MPLLIAFYSL LIHQSLLGNY PMSIRWLAHR YLLKQSVSFY QDEFAGRIST KVMQTALAVR
ETVMKSLDVF VYVMVYFTAI VVILAQADWR LMIPMLIWLA IYVTVQMYYV PKLKKVASEQ
ADARSLMSGR IVDSYTNIMT VKLFSHSQRE TQYAEEGMQD FLGTVHRQMR LVTGFNIWVE
MANYLLVFTI AALSIYLWTT SAISVGAIAV AVSLSLCING MSKWIMWEVS ALFENIGTVV
DGMTMLGKPI TVTDKPDAKP LVVKHGGITF DDVSFHYGEN KSVINHLNLN IKPGEKVGLV
GRSGAGKSTL VNLLLRFHDV ESGRILIDGQ PISEVTQESL RSKIGMVTQD TSLLHRSIRD
NILYGNPNAT EEQLLKATAQ AHAHEFILGL TDPHGNSGYD AQVGERGVKL SGGQRQRIAI
SRVLLKDAPL LVLDEATSAL DSEVEAAIQE SLNELMQGKT VIAIAHRLST IAAMDRLIVL
DKGQIVEQGS HQELIAQNGI YAHLWAHQTG GFIGCDEDEV EEAILA
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