| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0202 |
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| Symbol | |
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| ID | 5134957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 234775 |
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| End bp | 235611 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530525 |
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| Product | amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | YP_001215043 |
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| Protein GI | 147671730 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.55601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTAT TCGGACAACG TTTAGGTCGA TTCAGCGTTA AAACCTTACT TACGGGCTTG
TTGGGTCTGG CTTTCACTTT GCCAGCAGTG GCGAGCGACA CACCCAATCT TGATGCGATT
AAAGAGCGTG GCACGCTGCG CGTGGGTATG TCGACCTTTG TGCCTTGGGC AATGCGCGAT
AAGCAGGGTG AGCTGATTGG CTTTGAGATT GATGTCGCTA AACGCTTAGC CGCCGACTCA
GGTTGGCAAG TGGAATTTGT GCCGACCGCA TGGGATGGCA TTATTCCCGC TCTGCTGGCC
AAAAAATTTG ATGTGATCAT TGGCGGAATG TCGGTCACGC CTGAGCGTTC AAAAAGTGTG
CTGTTTACTG CACCCTACTC ACACTCTGGT GTGCAACTCG CTGCCAATAA AAAGCTCGCG
GAAGGTTTTA CTCAGCTCGA AGACTTTAAT AAGCGCAACG TAAAAATCGC GGCTCGCCGA
GGTGCTTTTA CCGTGCAAGT GGCGCGTGAA ACCTTCCCGA AAGCCAGCGT GCTGCAATTT
GATGACGATG CCCAAGCTTT CCAAGAAGTA ATCAACGGCA ACGCGCATGC GGTGATTGCT
TCAAGCCCAA AACCCGAGCA TGAAAGCATC AAACACAGTG ATTCGCTGTT CCTTCCTTTC
AGTGAGCGTT TAAGTAAAGG CAATGAAGCG TTTGCAGTGC GTTTAGGGGA AGAAGATAAG
AAAGCCTTTT TTGATCAATG GATTGCGGAC CGCACTGCTG ATGGCTGGCT GCAAGCGCGT
TACGAATACT GGTTCTCCAC TTTAGATTGG CAGGATCAGA TCGCCTCAGG TCAGTAA
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| Protein sequence | MQLFGQRLGR FSVKTLLTGL LGLAFTLPAV ASDTPNLDAI KERGTLRVGM STFVPWAMRD
KQGELIGFEI DVAKRLAADS GWQVEFVPTA WDGIIPALLA KKFDVIIGGM SVTPERSKSV
LFTAPYSHSG VQLAANKKLA EGFTQLEDFN KRNVKIAARR GAFTVQVARE TFPKASVLQF
DDDAQAFQEV INGNAHAVIA SSPKPEHESI KHSDSLFLPF SERLSKGNEA FAVRLGEEDK
KAFFDQWIAD RTADGWLQAR YEYWFSTLDW QDQIASGQ
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