| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0124 |
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| Symbol | |
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| ID | 5134741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 147190 |
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| End bp | 147909 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640530447 |
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| Product | hypothetical protein |
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| Protein accession | YP_001214965 |
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| Protein GI | 147672384 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAAGAA GTTTTGAAGT GCGCAAAGCC TCAATGGCGA AAACTCAAGG CGCAAAGATT
AAAGTTTACT CAAAATACGG TAAAGAGATT TACGTTTGTG CGAAAAACGG CGGTACTGAC
CCTGACATGA ACTTATCGCT GCGTCATCTG ATCACGAAAG CGAAAAAAGA CCAAGTACCC
GCACACGTTA TCGAAAAAGC ACTGGATAAA GCCAGCGGTG GAGCAGGTGA AGATTACCAA
CCAGCACGTT ACGAAGGTTT CGGCCCTGGT GGCGCGAGTG TGATCGTTGA CTGTCTAACG
GACAACGGTA ACCGTACCTA CCAAGACGTG CGCCAATGCT TCGTCAAAAC GGGCGCGAAA
ATTGGTACTC CAGGTGTGGT TGCACACATG TTTGATCACC AAGCGGTTTT CCAATTCCAA
GGCGATGATG AAGAAGCTAT TCTTGAAGCG CTGATGATGG CTGACGCGGA AGTGACAGAC
ATCGAGCATG AAGATGGTGT GATCACTGTA TTTGCACCTA ACACCGAATT CTTCAAAGTG
AAAACTGCTC TGAACGAAGC ATTCCCAGAT CTGACTCTGG ATGTGGAAGA GATCACTTTC
GTTCCACAAA ACCGCACTGT TGTAAGCGGT GAAGACGCAG AAAAATTCCA GAAGTTCCTC
GATATGCTGG ATGACTGCGA TGACGTACAG CAGGTTTACC ACAACGCGGA TATCGAATAA
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| Protein sequence | MGRSFEVRKA SMAKTQGAKI KVYSKYGKEI YVCAKNGGTD PDMNLSLRHL ITKAKKDQVP
AHVIEKALDK ASGGAGEDYQ PARYEGFGPG GASVIVDCLT DNGNRTYQDV RQCFVKTGAK
IGTPGVVAHM FDHQAVFQFQ GDDEEAILEA LMMADAEVTD IEHEDGVITV FAPNTEFFKV
KTALNEAFPD LTLDVEEITF VPQNRTVVSG EDAEKFQKFL DMLDDCDDVQ QVYHNADIE
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