| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | UUR10_0179 |
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| Symbol | rpoC |
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| ID | 6983791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ureaplasma urealyticum serovar 10 str. ATCC 33699 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011374 |
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| Strand | + |
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| Start bp | 213621 |
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| End bp | 217538 |
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| Gene Length | 3918 bp |
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| Protein Length | 1305 aa |
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| Translation table | 4 |
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| GC content | 31% |
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| IMG OID | 643399754 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_002284584 |
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| Protein GI | 209554253 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.276466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAA AAGGGATTAA ATCACTAACG ATTTCCATTG CTTCACCAGA ACAAATTTTA
AGTTGATCAA AAGGTGAAAT TACTAAGCCT GAAACGATTA ATTACAAATC ATTAAAACCA
GAGCCAAATG GGTTGTTTGA TGAAAGTATT TTTGGGCCTT CAAAAGATTA TGAATGTTAC
TGTGGAAAGT ATCGTAAAGT AAAACATAAG GGTAAAGTTT GTGAACGTTG TCACGTTGAA
ATTACTGAAT CAATCGTGCG TCGCGAACGA ATGGGTCATA TTGAATTAGC AGCACCTGTT
GCCCACATTT GATTTACAAA AGAATTACCT TCTCCATCAA AAATTTCATT ATTATTAGAT
ATTACATACA AAGAAGTTGA CCAAGTAGTT TATTTTGTTA ATTACATCGT TTTAGATGAA
GGAAACAACG AATATGATGG TAAGTCAATT TTTAATAAAA AAGAAGTTTT AGATTTAACA
TCACCAAAGA ATTCAATTAG ATCACGTAAT AAATTACGTC GTACATTACG TAATATTCAA
GAAAGAATTG AAGAAGAATT GAATCACGAA CGTGAAGCAT TAATTCAAGA TTTTGATTAT
CGTTTAGCTG TAACATATGA TCAAATGTTA AAAGATTCTA ATATTCCTTT TTCAGTGAAA
GATGTAATGG CTTTCATTGA AAAACACACT GGTGTACGTT TTGGAATTGG TGCTGAAGCT
ATTCATGAAT TATTAGAAAA ACTAAATCTT GAAGAAGAAC ACGAAAAGAT TAAACAAGCT
ATTCAAAATT CACCTAATGC TTATGATCAA AAAACAAAAC GTTTACTACG TCGTTTAGAA
TGTGTAAGAT GAATTAAAGA TTCAGGTTCA AAACCAGAAT GAATGGTAAT GACAAGAATT
CCTGTTACTC CATCTGAAAC ACGACCAATT ATTTCTTTAG ATGGTGGTCG TTTTACAACT
TCTGATACAA ATAATTTTTA TCGTAAAATT ATTATCCGTA ATGAACGTTT AAAACAAATG
CAAGCAACAG ATGCTCCAGA AATTTTATTA GATAATGAAA AACGTTTATT ACAAGAAGCA
GTTGACTCAT TATTTGATAA TAACTCACGT AAAAAACCAG TTGTTGGTAA AGATAAACGT
CCTTTAAAAT CATTATCAAA TCATCTTAAA GGAAAACAAG GGTTATTTAG ACAAAACTTA
TTAGGAAAAC GTGTTGATTA CTCAGGTCGT TCTGTAATTG TTGTTGGTCC AGAGTTAAAA
ATGTATGAGG TAGGTATTCC TGCTTTAATG ATTTTAAAAC TATTTAGACC ATACATTATT
TCTGAATTAA TTCGTAAACG TGATGAATTT GGTAATGAAA TTCAACCAAT TTGTGCCAAT
ATTAAATTAG CTGAACAAAA AATTCTTGCA CAAGATGATG AAATTTGACC AGTTGTTGAA
AAAGTTATTA AACAACGTCC TGTAATTTTA AACCGTGCCC CAACATTACA CCGTTTAGGT
ATTCAAGCCT TTGAACCAAA AATGGTAGAT GGAAAAGCGA TTCGTTTACA CCCATTAGTT
ACAACTGCTT TTAATGCGGA CTTCGATGGG GACCAAATGG CTGTTCACAT TCCTTTATCA
AAAGAAGCAG TAGCTGAAGC ACGTTCAATT CTTTTAGCTT CATGACATAT TCTTGGACCA
AAAGATGGAA AACCAATTAT TACTCCAACT CAAGATATGA TTTTAGGAAT TTACTATTTA
ACAAAAGAAA AATTCCCTCA ACCAATTGAA GAAATGATAC TTAAAGATCC AGTTCAAGCA
AGAATTGAAT TTATTAATCA TTTCCACATC TTTGCAACAC AAGATGAAGC CATTCGTGCT
TATAAACTAA AAACAATACG AATCAATGAT GTAATTGGAA TTACAACAAA AGCTTTTGAT
AATAAATCAT TTAGCAAAGA AGGTATTTTA GTTACAACAG TTGGAAAGAT TATTTTCAAC
CAAGCCTTCC CAACAAATTT CCCATATATT AATGATGTTA AAAATTTATA TGGTGATAAC
CAATTCGAAA TTATTGGAAT GCATGAAAGC ATTTTAGATT ATCTAAAAGC TTACAACCTA
AAAGAACCTT TAACTAAAAA GACTTTATCA ACAGTAATTG ATTATTTATA CAAAGTTTCT
GAAATTGAAG TTGTACCTCA AACAATGGAT AAAATTAAGG CTTTAGGGTT TAAATACTCA
ATGATTTCAG CGACAAGTAT TTCTGCTTTT GACATTCCAT CTTATGATCA AAAATATGAA
TACTTCAAAG AAACTGATGA ACTAGTTGCA AAACTTCGCG AGTTTTATTT AGATGGAAAA
TTAACTGATG ATGAACGATA TACAAAAGTT GTTCAAGCTT GATCACAAAC AAAAGACAAA
GTTACTCACG ATATTGAGAA GTTAATTAAT TCTGATGAAT ATAAAGACAA TCCAATCGTA
ATCATGGCTA AATCAGGAGC TCGTGGTAAT ACATCAAACT TTACTCAATT AGCAGGGATG
CGTGGGTTAA TGTCAAAATC ATATAATTAT GATCAAAAAA ATAATAGTGG TGTTATTAAA
GATACAATTG AAATTCCAAT TAAACACTCA TTTATTGAAG GATTATCAGT TAGTGAATAC
TTCAACTCAT CATTTGGTGC TCGTAAAGGG ATGACCGATA CAGCGATGAA AACTGCGAAA
TCAGGATACA TGACTCGTAA ATTAGTTGAT TCAACACAAG CTGTTGTTAT TAAAGGTAAT
GATTGTGGTA CAAAAGAAGG TATTATTGTT CGTGAAATTC GAAATACAAA AGATAATACT
TCAATTGAAT CATTAAAAGA TCGTATTGTT GGACGATTTA GTATTAATCC AATTTATGAT
ACAAAAAATA AATTGATTAT TGAAGGTGAT AAATTAATTA CTAATGAAAT CGCTAATATG
ATTCAAAATT CAGGTATTCG TGAAGTTGAA GTTCGTTCAC CACTGCATTG TTCATCACTT
TATGGTGTTT GTCAAAAATG TTTTGGTTTA GACTTATCAA CAAACAAATT AATCGAAACT
GGTACAGCAA TTGGGGTTAT TGCTGCTCAA TCAATTGGGG AACCAGGTAC ACAGTTAACA
ATGCGTACCT TCCATACTGG TGGGGTTGCT GGTGATACTA ATATTACCCA AGGTTTTGAA
AGAATTAAAC AATTATTTGA TTGCATCCAA CCACAAGAAA ATGAAAAAGC AATTATTTCA
CAAGTTAAAG GCACTGTTGA TCGAATTGAA AAAGATTCAA ACACTAATGG TTATAATGTT
GTAATTAAAT ACAATAAAGA TAACTTTGTA AGTTATCCAA CACGTCCAAA CGCTGTTTTA
CGTATTAAAA CAGGTGATAA TGTTGTTGCT GGTCAAAAAA TAACTGAAGG ATCAATCGAT
GTTAATGATT TACTAAAATA TGCAGGTATT GAAAATGTAC GTCATTACAT TATTAAAGAA
GTTCAAAAAG TTTATCGTAT GCAAGGGATT GAAATTTCAG ATAAATATAT TGAAGTAATT
ATTTCACAAC TTACAAATAA AGTAACAATT ACTAATCCAG GTGATTCAGG ATTGTTTGTT
GGGGAAACAA TTAGTATTAA TGAATTTACT GAAGTTGCTC AAAGTATGCT TGTTAATAAG
AAAAAACCAC CAAGTGCAAT TAACCAAGTA TTTGGTTTAG ATCATGCACC AAGTAAATCA
GGTTCATTCT TATCTGCTGC TTCATTCCAA GATACAAAGA AAATCTTAAC CGATGCTGCT
GCACGTTCAC AAAAAGACAT GTTAATTGGT CTAAAAGAAA ACGTTATTTT AGGAAACCTA
ATTCCTGCTG GAACTGGATT AAAAGACGTT GAAGAAGTGA TTGCTTACGG TGAAGAAATG
TATAAAAAAC AATACTAA
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| Protein sequence | MSQKGIKSLT ISIASPEQIL SWSKGEITKP ETINYKSLKP EPNGLFDESI FGPSKDYECY
CGKYRKVKHK GKVCERCHVE ITESIVRRER MGHIELAAPV AHIWFTKELP SPSKISLLLD
ITYKEVDQVV YFVNYIVLDE GNNEYDGKSI FNKKEVLDLT SPKNSIRSRN KLRRTLRNIQ
ERIEEELNHE REALIQDFDY RLAVTYDQML KDSNIPFSVK DVMAFIEKHT GVRFGIGAEA
IHELLEKLNL EEEHEKIKQA IQNSPNAYDQ KTKRLLRRLE CVRWIKDSGS KPEWMVMTRI
PVTPSETRPI ISLDGGRFTT SDTNNFYRKI IIRNERLKQM QATDAPEILL DNEKRLLQEA
VDSLFDNNSR KKPVVGKDKR PLKSLSNHLK GKQGLFRQNL LGKRVDYSGR SVIVVGPELK
MYEVGIPALM ILKLFRPYII SELIRKRDEF GNEIQPICAN IKLAEQKILA QDDEIWPVVE
KVIKQRPVIL NRAPTLHRLG IQAFEPKMVD GKAIRLHPLV TTAFNADFDG DQMAVHIPLS
KEAVAEARSI LLASWHILGP KDGKPIITPT QDMILGIYYL TKEKFPQPIE EMILKDPVQA
RIEFINHFHI FATQDEAIRA YKLKTIRIND VIGITTKAFD NKSFSKEGIL VTTVGKIIFN
QAFPTNFPYI NDVKNLYGDN QFEIIGMHES ILDYLKAYNL KEPLTKKTLS TVIDYLYKVS
EIEVVPQTMD KIKALGFKYS MISATSISAF DIPSYDQKYE YFKETDELVA KLREFYLDGK
LTDDERYTKV VQAWSQTKDK VTHDIEKLIN SDEYKDNPIV IMAKSGARGN TSNFTQLAGM
RGLMSKSYNY DQKNNSGVIK DTIEIPIKHS FIEGLSVSEY FNSSFGARKG MTDTAMKTAK
SGYMTRKLVD STQAVVIKGN DCGTKEGIIV REIRNTKDNT SIESLKDRIV GRFSINPIYD
TKNKLIIEGD KLITNEIANM IQNSGIREVE VRSPLHCSSL YGVCQKCFGL DLSTNKLIET
GTAIGVIAAQ SIGEPGTQLT MRTFHTGGVA GDTNITQGFE RIKQLFDCIQ PQENEKAIIS
QVKGTVDRIE KDSNTNGYNV VIKYNKDNFV SYPTRPNAVL RIKTGDNVVA GQKITEGSID
VNDLLKYAGI ENVRHYIIKE VQKVYRMQGI EISDKYIEVI ISQLTNKVTI TNPGDSGLFV
GETISINEFT EVAQSMLVNK KKPPSAINQV FGLDHAPSKS GSFLSAASFQ DTKKILTDAA
ARSQKDMLIG LKENVILGNL IPAGTGLKDV EEVIAYGEEM YKKQY
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