| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tter_2448 |
|---|
| Symbol | |
|---|
| ID | 8640477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobaculum terrenum ATCC BAA-798 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013526 |
|---|
| Strand | - |
|---|
| Start bp | 601286 |
|---|
| End bp | 602878 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | glycoside hydrolase clan GH-D |
|---|
| Protein accession | YP_003324164 |
|---|
| Protein GI | 269839472 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTCAGAG GAGGGGCCTA CGACGACGCG CTACCGCCCA AGGGATACGC CCTGCAGACC
CTGGACAGGC TGAGCTATAG CCTATCCAGG CCGAGGGTCT ACGCCTCCGC AGGGGACGGC
AGGTCCACTG GAGAGTTCGT CCCCTGGTTC TGCCTACAAG GAGGCGGCGG TGGGGTCATG
GGGGCGCTGC TCTGGTCCGG CCACTGGCGG ATGGAAGCTA GGTACACCCC AGCGGGTGCG
AGGATGGCGC TGGGACTATC TAACTTCGAA CACCTGCTGG CCCCCGGAGG CGCTCTGCAG
CTGCCGAGGG CCCTCTTGCT GGGGTTCTCG GGGGACCTGG ACGAGGCAGC TAACGCCCTG
CGCGTATGGG AGCTAAGGTA TCTCGCGCCT CCCATCCCAG AGAACTGGCC CTGGGTACAG
TACAACCACT GGTACGCCTA CGAAGGGGAT ATAGACGAGG CTAGGCTGCT GGCCGAGGCG
GAGATAGCTG CGCGGGTGGG ATGCGAGGTC TTCGTCATAG ACGATGGCTG GTTCGCTGGC
AGGAGGCCCG ATTCCTACGT CTCATGGTGG GGGCAGTGGC GGGAGGACCG CAGCCGCTTT
CCCTCGGGCT TGTGGGGCTT CGGCGAGCGC ATCAGGCAGC TGGGAATGCG CTTTGGGCTG
TGGGTGGAGC CCGAGCGGGT GGACATGCAG GGGGAGGTAG CCACGGAGCA TCCCGAGTGG
CTGGCGGCAA GAGACGGGGT GCCCATCACC CGTAGATGGG GGGATGAGAT CGCGGGGCAC
CTCTGCCTGG GCAACCCTGA TGTCCAGGAT TGGATGGCGA GCGAGGTGGT CAGGGTGGTG
CACGAGTACG GTGTGCAGTG GCTCAAGTGG GACTACAACA TGGGGTACGC CGCCGGATGC
AACAGGGAGG ACCACGGCCA TCAGGCGGGC GATGGGCACT ACGCTCACAC GATGGGGCTG
TACCGAGTGC TGGCCACGGT GCGGGAATCC TGCCCCGGGC TCATCATCGA GAACTGCGCC
AGTGGCGGCC ACAGGGCAGA CCTGGGCATG CTCACTCACT CACACATCCA ATGGCTGTCC
GACTACACTC ACCGGGCTGC GTCTTGTCGG CGGCATGTGC AGGGGGCGGG TTACTACTTG
CCGCTGCAGT GGCTCAACGC TTGGGTGCTC GAGGGCGCAG ATGCCTACGA GTTCCGCAGC
AGGATGGGCG GTGCCTTGGG GATCTCCGCC CGCCTCGGCA GCTGGAGCCA GCAACAGCTG
GAGCTGCTCG CCCGAGGGAT AGCCGAGTAC AAAGCCGTGA TAAGGCCGCT GCTCTCCGGG
CACAGGTCCC TCCTGAGCTC TCCCTGGCAT GAAGGCTGGG ACGTGTGGCA GCTCTGCCAC
CCACGCTCGG GAGAGTTCAC CATCCTGGCC TTCCGAGACC CATCGGCCAT AAGTAGCGTT
AGGGTCGCTC CTAGGAGCAT CTCTCCTGAG GAGGACTACA TCCTAATGAA TCTGGACACC
GGAGAATCCT TCCAGATGCA CGGTAAGGGG CTGCTGGAGA TCTCTGTGGC TAGACATGCT
AGCGTGCTCC TAATAGGTAA GCTGGTATCG TGA
|
|---|
| Protein sequence | MLRGGAYDDA LPPKGYALQT LDRLSYSLSR PRVYASAGDG RSTGEFVPWF CLQGGGGGVM
GALLWSGHWR MEARYTPAGA RMALGLSNFE HLLAPGGALQ LPRALLLGFS GDLDEAANAL
RVWELRYLAP PIPENWPWVQ YNHWYAYEGD IDEARLLAEA EIAARVGCEV FVIDDGWFAG
RRPDSYVSWW GQWREDRSRF PSGLWGFGER IRQLGMRFGL WVEPERVDMQ GEVATEHPEW
LAARDGVPIT RRWGDEIAGH LCLGNPDVQD WMASEVVRVV HEYGVQWLKW DYNMGYAAGC
NREDHGHQAG DGHYAHTMGL YRVLATVRES CPGLIIENCA SGGHRADLGM LTHSHIQWLS
DYTHRAASCR RHVQGAGYYL PLQWLNAWVL EGADAYEFRS RMGGALGISA RLGSWSQQQL
ELLARGIAEY KAVIRPLLSG HRSLLSSPWH EGWDVWQLCH PRSGEFTILA FRDPSAISSV
RVAPRSISPE EDYILMNLDT GESFQMHGKG LLEISVARHA SVLLIGKLVS
|
|---|
| |