Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tter_1425 |
Symbol | |
ID | 8645922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobaculum terrenum ATCC BAA-798 |
Kingdom | Bacteria |
Replicon accession | NC_013525 |
Strand | - |
Start bp | 1551162 |
End bp | 1553015 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | VanW family protein |
Protein accession | YP_003323153 |
Protein GI | 269926530 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAAGA TCCTCGCCAG GGAAATCGAG TCTTGGCGAG AAGAGGCATC TGAGCTCAGA AACTACCCCC ACGGTAGATC ATTTCTACTT AGGCTTATTC GGGCCGCTTT GCCAGTACTG GCGGTCTTTG TGGTGGTTTT GTTAGGCTCT GCTTTTCTCA TCACAAGAGC TTACTCAGAT AGGATATACC CTCAGGTTGT GGTTGGGAAT ATAGCTGTAG GCTCCCTTAC TCAGGATGAT GCTAAGGAAA AGCTGGAGTC CTCGCTAGAG GATTACCTGA ATAATCCTGT CGTACTGACT TTTGGCCAAC TTCAATGGCA TCCCGCTGCT GAGGACATAG GACTTACGAT AGACGTAGAA GCCACCGTCA ACAGGGCTAT GAGAGCTGGT AGAGAAGATC CAGTTATCTT AGTCATTGCT CGCACACTAG TTGGCCAGCA AAGTCCAGAG GTCGTGCCTA TTGTCATGCG TATAGATGAA AGTAGGTTGT CAAGCTATTT GTCGGACATA GGCAGGCAAA TCAATCGGGA TCCTCTAAAT CCTTCCATCC AAGTCTCTGA AGGCAACATT CAGATAGAGG GTGGTGGAGC CGGTTATACT TTCCTTCAGC CTGAGACAGA ATCCAAGGTT TTGACCTCTC TAAGGAAGAT GTCTAAGGGG CCTGTTAGCA TCGCTGTGTA CACTACTGCT GGTACTATCA GCAGTCAAGA AGTCAGTAAG GCAGAGTCAC TGGCTAAGAG CATGATTTCA TCGCCTATAA CGTTAGTTGG TGACAATCAA CAGAAATGGC AGATAACCAC TGATAAGCTC CAAGATTGGC TTAGAAGTAA ACCCGTAAAG GTAAAAGGTA ACACTGAGCT AGATGTCTAC TTAGATCCTG TTGAACTGGA GAACTACCTT GATTCAGTTG CTAAGGATAT AAATTCAGAA CCAGTAAATG CTCGATTAAG ATGGGATAAT GGGCATCTGT CGGTTCTTGC TCCAGGAAAA CTGGGCAGGA GACTAGATAT TGATCGAGCT ATTGGCCTAA TACAGGAAGC TGCTAAATCG AATTCTCGGC AGGTGCAACT CCCTATTTCT CGTATCAGCC CATCTGTATC AGAGAACAAC ATAGCTTCGC TTGGTATCAA GGAGCTTATA GCCTCAGGTG TATCGGGATT TAGAGGGTCG AGACCGGAAC GTATAGATAA CATCAAGAAG GCGGCCCAGG CTATCAATGG TTATGTAATA CCTGCGGGCA GCGATTTCTC GTTCGCTGAG GCTATTGGTA AGATCTCAGA ATCTGCAGGT TATAAGCCTG AACTTGTTGG GGATAATAGG CTTGAGCTAC AAGGGTGGCC AGGCGGTATT AATCAGGTCG CCACAACTGT TTTCAGAGCC GCGCTCTATG CAGGATTGCC AATTCTAGAA AGGCATTCCA TGCCTTACCG ATTGGACTTC TATCAACAGG AGAATCAGCA ACCTGGGACC GACGCTATGG TTCTCGTTCC GGGTACCGAC CTGAGATTTA CGAACAGCAC GCCTGCTGCT ATCCTGATTC AGGTCAGCGT GTCAGAACAG GACCAGACCG TACAGGTGAA TCTTTATGGT ACCGATCCAG GTTGGTCGGT TGATGTAAAA CCACCCATCA TAGAAAATGT CGTCCAGCCT ATAGGCGATA TCTATTGGAC TGACCCTACA TTAGAATCTG GCAAGACTGA GACTTATCTA TACGCTTCTG CAGGTGCTGA TGTGGTAATA GAGCGTACTG TACGTAAGGG AACGGAAGTC ATCCTGGATG ATAATATTAC GAGCAGTTAT GATCCGTTAC CTACAGTATT CGCTGTAGGT AGTGCTAACT CAGACAATGG TTAG
|
Protein sequence | MEKILAREIE SWREEASELR NYPHGRSFLL RLIRAALPVL AVFVVVLLGS AFLITRAYSD RIYPQVVVGN IAVGSLTQDD AKEKLESSLE DYLNNPVVLT FGQLQWHPAA EDIGLTIDVE ATVNRAMRAG REDPVILVIA RTLVGQQSPE VVPIVMRIDE SRLSSYLSDI GRQINRDPLN PSIQVSEGNI QIEGGGAGYT FLQPETESKV LTSLRKMSKG PVSIAVYTTA GTISSQEVSK AESLAKSMIS SPITLVGDNQ QKWQITTDKL QDWLRSKPVK VKGNTELDVY LDPVELENYL DSVAKDINSE PVNARLRWDN GHLSVLAPGK LGRRLDIDRA IGLIQEAAKS NSRQVQLPIS RISPSVSENN IASLGIKELI ASGVSGFRGS RPERIDNIKK AAQAINGYVI PAGSDFSFAE AIGKISESAG YKPELVGDNR LELQGWPGGI NQVATTVFRA ALYAGLPILE RHSMPYRLDF YQQENQQPGT DAMVLVPGTD LRFTNSTPAA ILIQVSVSEQ DQTVQVNLYG TDPGWSVDVK PPIIENVVQP IGDIYWTDPT LESGKTETYL YASAGADVVI ERTVRKGTEV ILDDNITSSY DPLPTVFAVG SANSDNG
|
| |