| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1804 |
|---|
| Symbol | |
|---|
| ID | 5171464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1814352 |
|---|
| End bp | 1815152 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640564325 |
|---|
| Product | methyltransferase type 12 |
|---|
| Protein accession | YP_001245380 |
|---|
| Protein GI | 148270920 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGATAT GTTATGATTT TACAGAAACA CAGGAGGTGG GAATTATTTA CAAGCGATTC
GCCCGAGTTT TTCACGAAGG GCCGTACACA TCGTTTTCAA GGAGAATAGC GAAAAATTTC
ACCAAAATTC TGGAAAACTT TCATGTTCGA GGAAAAAAAG TATTGGATGT GGCCTGTGGA
GAAGGAACGT TTGCTGTGGA AATCGCTAAG CAGGGCTTTG AAGTGGTGGG GATAGACCTT
TCACCTGAGA TGCTGGAGTT TGCCAGAAAA AGGGCAAAAG AAGAAAGCGT ACCTGTGGTT
TTTTTGAAAA AAGACATGAG AGAACTCGAT TTCCACGAAG AATTCGATAT CGTCACCTGC
TGGTTCGACA GTCTCAACTA TCTTTTGGAT TACAGCGATT TGAAAAAAAC TTTTGAGAAA
GTTCATGAAG CTTTGAAAGC AGGCGGAGCG TTGCTTTTCG ACATGAACAC CGTTTATGGG
CTTTTGATGG CCAATCAGGA AGGCCCCGTG TACATTCAGC AGGATGGAAA GGACATCTTC
GAGGTTCAAA CCATAGAGTT CGAACTGGAG GAATCCATTG CCACCTTCTA TGTGACCGTT
TTCGAGAGAA AGCAAGGGAA CCTGTGGGAG AGATTCGATG AGATACATAG AGAAAGAGGC
TACAGAGTGA AAGAAATCGC GTATGCACTG AGTGACGCGG GGTTTGTGTT TTCTTTTTAT
GAAGATCTTC TCAGCAAGTC CCCTCTGACC AGCTACAGTA GAAGACTGTG GTGCGTTGCG
AGGAAGGTGA GCGCAGGATG A
|
|---|
| Protein sequence | MKICYDFTET QEVGIIYKRF ARVFHEGPYT SFSRRIAKNF TKILENFHVR GKKVLDVACG
EGTFAVEIAK QGFEVVGIDL SPEMLEFARK RAKEESVPVV FLKKDMRELD FHEEFDIVTC
WFDSLNYLLD YSDLKKTFEK VHEALKAGGA LLFDMNTVYG LLMANQEGPV YIQQDGKDIF
EVQTIEFELE ESIATFYVTV FERKQGNLWE RFDEIHRERG YRVKEIAYAL SDAGFVFSFY
EDLLSKSPLT SYSRRLWCVA RKVSAG
|
|---|
| |