| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1797 |
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| Symbol | |
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| ID | 5171625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1806810 |
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| End bp | 1808081 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640564318 |
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| Product | PhoPQ-activated pathogenicity-related protein-like protein |
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| Protein accession | YP_001245373 |
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| Protein GI | 148270913 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4287] PhoPQ-activated pathogenicity-related protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0548814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG CGACAAGTTT GATAATGCTG ATTCTCACCG CCACGATCTT CGCCGTGCAT
CCTCTGGACG TTCTCACTCG AGAAAGAGGA ACTTCTCTTT ACGAAACGAA GATCTCAACC
ACTACCCAGG AGGGTGAGGA AATATACGTT CTCAAATCCT ATGGAATGAA ATGGCAGGAG
ATTCAGTGGT TTCACAGGGT GGGTATCATT CTTCCATCCA ATCTACGATA CAAAGATCGA
GCATTCCTGC TGATAACAGG TGGGAGCAGG AAAGAGGAAA ACGAAGGTTA CTACAGGTCG
TTTCTGGAGG ACGTCCTGGA GTATCTGTGG GTGGCGAGGA TGTTTGAGTC TCCCTTCGTG
GTTGTGGGTG ATGTTCCCAA TCAGCCGATC TTTGGTCTCA GAGAAGATGC GTTGATTGCA
GAGACGTTCA GAATGTACCT TGAAAAACCC GATCCATACC TTCCTCTCCT TGTTCCCATG
ACGTACGGTG TGATAAAGGC CATGGACACA GCGCAGGATT TCCTTGAGAA AAAAGGCATA
GAAATCAAAG GCTTCATGGT TTCAGGGGCT TCCAAAAGAG GGTGGACCAC GTATCTTACG
GCGATCTTTG ACCCGCGTGT TTTCGCCATC GCTCCTATGG TGTACGACAA TCTGAACATA
GAAGCCCAGC TCTTGCATCA AAAGGAGTAC TACAGCACTT ACAGCGAAAA ACTCAAAGAT
TATCAGGAAA GAGGGCTCTT CGAAATTCTC GAAAGTGATC TGGGAAAAAG GCTCCTTGAA
ATGGTCGATC CTTACGCTAT GAGATTGAGA CTCTCTCTTC CAAAAATCCT CGTGCTTGGC
ACCAACGATG AATACTGGAC CGTGGATTCG GCGAACCTCT ACGTGGACGA CCTCCCGGGC
GAAACCTTTC TCTTCTACTC CCCGAACGAT CCTCACAACC TGAAGAATGT GAAGGAGATA
ATAGAGACTC TCTCTTCGTT CTTCAAGATG TATCCCAAAC TACCGAAGGT GGAATTTTCC
TACGAGGGCG GTAAAATACT CGTTGAAAAG ATCCCGGAAA TTGTAGACGC GGAACTGTGG
TTTGCAAGAT CGAAGAGCAG AGATTTCAGA AAGACGGTGT GGCTTAGGCG TGGCGTGGAA
GAAACCGATT ATTCGCTGAT CGGGGTACCT CCTGAAAAGC CTGAAGGTTT TTATCAAGCG
TACTTCTTGA GAGTCACTCT CGAAATCAAT GGGTTGAGGA TGAAGCTTTG CAGTAAGATG
ATAGTGGAAT AG
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| Protein sequence | MKKATSLIML ILTATIFAVH PLDVLTRERG TSLYETKIST TTQEGEEIYV LKSYGMKWQE
IQWFHRVGII LPSNLRYKDR AFLLITGGSR KEENEGYYRS FLEDVLEYLW VARMFESPFV
VVGDVPNQPI FGLREDALIA ETFRMYLEKP DPYLPLLVPM TYGVIKAMDT AQDFLEKKGI
EIKGFMVSGA SKRGWTTYLT AIFDPRVFAI APMVYDNLNI EAQLLHQKEY YSTYSEKLKD
YQERGLFEIL ESDLGKRLLE MVDPYAMRLR LSLPKILVLG TNDEYWTVDS ANLYVDDLPG
ETFLFYSPND PHNLKNVKEI IETLSSFFKM YPKLPKVEFS YEGGKILVEK IPEIVDAELW
FARSKSRDFR KTVWLRRGVE ETDYSLIGVP PEKPEGFYQA YFLRVTLEIN GLRMKLCSKM
IVE
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