Gene Tpet_1712 details

Gene Information

• Locus tag: Tpet_1712
• Symbol: hisH
• ID: 5171145
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 1711056
• End bp: 1711661
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640564238
• Product: imidazole glycerol phosphate synthase subunit HisH
• Protein accession: YP_001245293
• Protein GI: 148270833
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0118] Glutamine amidotransferase
• TIGRFAM ID: [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGGATCG GAATAATCTC TGTTGGTCCG GGAAACATAA TGAACCTGTA CCGTGGAGTG 
AAGAGGGCAT CAGAAAATTT TGAGGATGTT TCGATAGAAC TCGTGGAGTC ACCTCAAGAC 
GATCTGTACG ATCTTCTGTT CATCCCGGGT GTAGGACACT TCGGCGAAGG AATGAGACGA 
CTCAGAGAGA ACGGTCTTGT TGAGTTCATA AAAAAACACG TCGAAGATGG AAAATACGTG 
GTCGGAGTCT GCCTTGGAAT GCAGCTCCTT TTTGAAGAGA GCGAAGAGGC ACCCGGCGTA 
AAGGGTCTTT CTCTCATAGA AGGAAACGTC GTGAAACTGA AGAGTAGAAG ACTTCCACAC 
ATGGGCTGGA ACGAGGTGAT CTTCAAAGGC ACGTTTCCGA ACGGGTATTA CTACTTCGTC 
CACACCTACA GAGCCGTGTG CAAAGAGGAA CACGTTCTGG GAACAACGGA ATACGACGGT 
GAGATCTTTC CATCCGCGGT GAGGAAGGGG AGAATTCTGG GTTTTCAGTT CCATCCCGAA 
AAGAGTTCAA AAATCGGAAG AAAACTGCTT GAGAAGGTGA TCGAATGCTC GTTGTCCCGG 
CGATAG 

 

Protein sequence

MRIGIISVGP GNIMNLYRGV KRASENFEDV SIELVESPQD DLYDLLFIPG VGHFGEGMRR 
LRENGLVEFI KKHVEDGKYV VGVCLGMQLL FEESEEAPGV KGLSLIEGNV VKLKSRRLPH 
MGWNEVIFKG TFPNGYYYFV HTYRAVCKEE HVLGTTEYDG EIFPSAVRKG RILGFQFHPE 
KSSKIGRKLL EKVIECSLSR R