| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1680 |
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| Symbol | |
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| ID | 5170506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1678238 |
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| End bp | 1679089 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640564206 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001245261 |
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| Protein GI | 148270801 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000757089 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACAAC TCATTAAGAC CCGTTTTGTA TTTCTTTTAC CTGGTCTGTT TTTTATGTCT
CTCTTTGTTC TTGTACCTAT AGTTTCTATA TTTTTCATTT CTTTTTATTC ATGGAATCTT
CTGTCTCCGA TGAGGTTTAT AGGATGGGCA AATTTCAAAA GGATGATATC TGATAAATAC
TTCTGGAATT CACTTGTTGT GACCTTCAAG TTGATGGGAC TCGGCGTTCC CATAAATTTC
TTTCTGTCTC TCAGTCTGGC TCTTGCTCTT TACAGAGAGG ATAGATTTTC GAAGATTTTC
AGAGCCATTT TCTACTGGCC GTGTCTTATG CCTGCAATAG CAGGAGCAAC GATGTGGAAG
TGGATGTTTT CGTATCACAC AGGTCTCTTT AATTACATTC TTAGAACTCT TGGTCTTTCT
CCCATTTACT GGCTTGAAAA ACCCCTAAAC GCTTTATTCT CAGTGGTGCT TTCGGGTATC
TGGGGTGTGG GGTTCTTCAT GATGATGTTC ATCACAGGTC TCCAGAACAT ACCACAGGAG
CTGATAGAAG CGGCCAGAAT CGATGGAGCA AACAGATGGC AGACCTTCTG GTATGTGACC
TTCCCATGTT TGAAGAACAC CAACTTGCTT GTGCTTATGG TGTCTGTTGC TTATTCTCTG
AGAAGTTTTG CCGGTATTTA TGCTTTAACA GGAGGAGGTC CCGGTTATGC CACCACGAAC
ATCGCCTTGT ACATCTACAG ATCAGGCCTT ACACAATTCA GGATAGGATA TGCGTACGCA
ATGAGTGTTG TTTACTTTGT ACTTGCACTT GTGGTGGGGC TGATCATCTT AAGGTTGCAG
AGGGAGGAAT AA
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| Protein sequence | MRQLIKTRFV FLLPGLFFMS LFVLVPIVSI FFISFYSWNL LSPMRFIGWA NFKRMISDKY
FWNSLVVTFK LMGLGVPINF FLSLSLALAL YREDRFSKIF RAIFYWPCLM PAIAGATMWK
WMFSYHTGLF NYILRTLGLS PIYWLEKPLN ALFSVVLSGI WGVGFFMMMF ITGLQNIPQE
LIEAARIDGA NRWQTFWYVT FPCLKNTNLL VLMVSVAYSL RSFAGIYALT GGGPGYATTN
IALYIYRSGL TQFRIGYAYA MSVVYFVLAL VVGLIILRLQ REE
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