| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1583 |
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| Symbol | |
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| ID | 5170084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1583848 |
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| End bp | 1584972 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640564109 |
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| Product | putative oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_001245165 |
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| Protein GI | 148270705 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACTCG CTGTTTACGT CCATGTTCCC TTTTGCAAGA GCAAGTGTGT GTACTGCGAT
TTTTACTCTG TTGTCTCTGA AAAATTTGAC GAGTATTTCT CTCATCTCCT GAGAGAAATC
GATCTCTACG AAGAAGTACT CAGCGAAAGC GAGATAAAAA CCGTCTACTT CGGTGGAGGG
ACTCCTTCCG TTGTCCCTCC TTCTTTTTTG AAAATGGTTT TGGAAAAACT GGAGAGAGTC
TCCAGAGGTT TCACACCAGA TGAAATAACC ATCGAGGTCA ACCCGGAGTC TGTTGAAACA
GAGAAACTGA AAATCTACAA ACAAATCGGA ATCAACAGAA TCAGTCTCGG TGTTCAGGCC
TGCGATGACA CTGTGCTGAA GAACGCTGGA AGGCTCTACA AAGAAGAAAC CCTCAAGAAA
AAAGCGAAGA TAGTTCTGGA ACAGTTCGAA AACGTGAATT TCGATTTTAT TCTTGGACTT
CCTGGTGAGA CCGACATCAC ACTGAAGAAA GACTTCCGTT TCCTTGAAGA ATTTCCCCCT
CAGCACGTTT CGCTATATCT CCTCGAGGTA GACGAAAGAA CAAGACTTTT CGATCTCATT
CAGAAAGGTC TTGTAGAACT CCCCGAAGAA GACGATGTGG AAAGGAGGCA CGACCTTTTC
GTTGAATTTC TGAAAGAACG AGGATTTCTC AGATACGAGA TCTCGAACTT TGCCAAACCA
GGGAAGAAAT CTCTTCACAA CCTCTTCTAC TGGAGAAATG AAAACTATCT GGGACTCGGT
GTTTCCGCAG GTGGGCACAT CGGAAGGTTT CGATACGTGA ACGCCTCTGA TCTTAAAGAG
TACGAGGAAA AAATCACCAA AGGAGAATTA CCTTACGAAT ACGTGCACGA AAACACAGAA
GAAGAGGAAG CGCTGGAGAC AGTCTTCATG GGTTTGAGGA TAAAGGAAGG AGTAGAGTTA
AACCGGGTGA AAATTCTCCT TCCCCTGCTA GAAAAGTTAC AGAAAAAGTA CCCTTGTTAT
CTGAAGGTGA AAAATGGTAA AATTTTTTTA AGCGAGGATG GTATGAATTT CTCAAAGAAG
ATACTCTCTG ATCTCATCGA ATGGTACAGG GAGGGCGGGA GATGA
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| Protein sequence | MKLAVYVHVP FCKSKCVYCD FYSVVSEKFD EYFSHLLREI DLYEEVLSES EIKTVYFGGG
TPSVVPPSFL KMVLEKLERV SRGFTPDEIT IEVNPESVET EKLKIYKQIG INRISLGVQA
CDDTVLKNAG RLYKEETLKK KAKIVLEQFE NVNFDFILGL PGETDITLKK DFRFLEEFPP
QHVSLYLLEV DERTRLFDLI QKGLVELPEE DDVERRHDLF VEFLKERGFL RYEISNFAKP
GKKSLHNLFY WRNENYLGLG VSAGGHIGRF RYVNASDLKE YEEKITKGEL PYEYVHENTE
EEEALETVFM GLRIKEGVEL NRVKILLPLL EKLQKKYPCY LKVKNGKIFL SEDGMNFSKK
ILSDLIEWYR EGGR
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