Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1501 |
Symbol | |
ID | 5171502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1489245 |
End bp | 1490384 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640564027 |
Product | cystathionine gamma-lyase |
Protein accession | YP_001245085 |
Protein GI | 148270625 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000289622 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACATAG ACGACATTCT GTTCTCCTAC GGAGAAGAGG ACATTCCTCT GAAAGCACTG TCGTTTCCCA TCTTCGAAAC GACGAATTTC TACTTCGACA GTTTCGATGA GATGTCAAAA GCCCTCAGAA ACGGAGACTA CGAGTTCGTC TACAAAAGAG GAAGCAATCC CACAACAAGA CTGGTGGAAA AGAAACTCGC AGCGTTGGAA GAATGCGAAG ATGCCCGCCT CGTTGCTTCT GGAATGAGTG CCATTTCGCT TTCCATCCTT CACTTCCTCA GCTCGGGAGA TCACGTCGTG TGTGTGGACG AAGCTTACTC CTGGGCGAAG AAGTTCTTCA ACTACCTTTC AAGGAAGTTC GATATAAAAG TCAGCTACGT TCCTCCAGAT GCGGAAAAAA TAGTCGAAGC CATCACGAAG AAGACAAAGC TCATCTACCT TGAAAGTCCC ACGAGCATGA GGATGAAGGT GATCGACATA AGAAAGGTCA CAGAAGTGGC AAGAGAACTC AAAATAAAAA CCGTCATAGA CAACACCTGG GCATCACCGA TCTTCCAGAA ACCAAAGCTT CTGGGAGTGG ATGTGGTGGT CCACTCCGCG ACGAAGTACA TCTCGGGGCA CGGAGACGTG ATGGCGGGAG TGATAGCTGG AGACAGTGAA GATATGAAGA ACATCTTCGT GGATGAATAC AAAAACATCG GTCCAGTTCT CTCGCCCATA GAAGCCTGGC TCATTTTGAG GGGTCTTAGA ACGCTGGAAC TCCGTATGAA AAAGCACTAC GAAAACGCTC TTTTGGTGTC AGATTTCCTC ATGGATCACC CGAAGGTCCT CGAAGTGAAC TATCCGATGA ATCCAAGGTC TCCGCAGTAC GAACTCGCTT CTTCTCAGAT GAGCGGTGGC TCAGGATTGA TGAGCTTCAG GCTGAAAACA GACAGCGAAG AGAAAGTAAA AGAATTCGTC GAAAGTCTGA AGGTTTTCAA GATGGCTGTG AGTTGGGGAA GCCACGAGAA CCTTGTTGTT CCAAGGGTGG CCTATGGTGA CTGCCCGAAA GAAGACGTGA ACCTGATAAG AATCCACGTG GGCCTTGGGA ATCCAGAAAA GCTCGTGGAA GATCTGGATC AAGCGCTTAA AAAGATTTAA
|
Protein sequence | MNIDDILFSY GEEDIPLKAL SFPIFETTNF YFDSFDEMSK ALRNGDYEFV YKRGSNPTTR LVEKKLAALE ECEDARLVAS GMSAISLSIL HFLSSGDHVV CVDEAYSWAK KFFNYLSRKF DIKVSYVPPD AEKIVEAITK KTKLIYLESP TSMRMKVIDI RKVTEVAREL KIKTVIDNTW ASPIFQKPKL LGVDVVVHSA TKYISGHGDV MAGVIAGDSE DMKNIFVDEY KNIGPVLSPI EAWLILRGLR TLELRMKKHY ENALLVSDFL MDHPKVLEVN YPMNPRSPQY ELASSQMSGG SGLMSFRLKT DSEEKVKEFV ESLKVFKMAV SWGSHENLVV PRVAYGDCPK EDVNLIRIHV GLGNPEKLVE DLDQALKKI
|
| |