Gene Tpet_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1501 
Symbol 
ID5171502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1489245 
End bp1490384 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content48% 
IMG OID640564027 
Productcystathionine gamma-lyase 
Protein accessionYP_001245085 
Protein GI148270625 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000289622 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATAG ACGACATTCT GTTCTCCTAC GGAGAAGAGG ACATTCCTCT GAAAGCACTG 
TCGTTTCCCA TCTTCGAAAC GACGAATTTC TACTTCGACA GTTTCGATGA GATGTCAAAA
GCCCTCAGAA ACGGAGACTA CGAGTTCGTC TACAAAAGAG GAAGCAATCC CACAACAAGA
CTGGTGGAAA AGAAACTCGC AGCGTTGGAA GAATGCGAAG ATGCCCGCCT CGTTGCTTCT
GGAATGAGTG CCATTTCGCT TTCCATCCTT CACTTCCTCA GCTCGGGAGA TCACGTCGTG
TGTGTGGACG AAGCTTACTC CTGGGCGAAG AAGTTCTTCA ACTACCTTTC AAGGAAGTTC
GATATAAAAG TCAGCTACGT TCCTCCAGAT GCGGAAAAAA TAGTCGAAGC CATCACGAAG
AAGACAAAGC TCATCTACCT TGAAAGTCCC ACGAGCATGA GGATGAAGGT GATCGACATA
AGAAAGGTCA CAGAAGTGGC AAGAGAACTC AAAATAAAAA CCGTCATAGA CAACACCTGG
GCATCACCGA TCTTCCAGAA ACCAAAGCTT CTGGGAGTGG ATGTGGTGGT CCACTCCGCG
ACGAAGTACA TCTCGGGGCA CGGAGACGTG ATGGCGGGAG TGATAGCTGG AGACAGTGAA
GATATGAAGA ACATCTTCGT GGATGAATAC AAAAACATCG GTCCAGTTCT CTCGCCCATA
GAAGCCTGGC TCATTTTGAG GGGTCTTAGA ACGCTGGAAC TCCGTATGAA AAAGCACTAC
GAAAACGCTC TTTTGGTGTC AGATTTCCTC ATGGATCACC CGAAGGTCCT CGAAGTGAAC
TATCCGATGA ATCCAAGGTC TCCGCAGTAC GAACTCGCTT CTTCTCAGAT GAGCGGTGGC
TCAGGATTGA TGAGCTTCAG GCTGAAAACA GACAGCGAAG AGAAAGTAAA AGAATTCGTC
GAAAGTCTGA AGGTTTTCAA GATGGCTGTG AGTTGGGGAA GCCACGAGAA CCTTGTTGTT
CCAAGGGTGG CCTATGGTGA CTGCCCGAAA GAAGACGTGA ACCTGATAAG AATCCACGTG
GGCCTTGGGA ATCCAGAAAA GCTCGTGGAA GATCTGGATC AAGCGCTTAA AAAGATTTAA
 
Protein sequence
MNIDDILFSY GEEDIPLKAL SFPIFETTNF YFDSFDEMSK ALRNGDYEFV YKRGSNPTTR 
LVEKKLAALE ECEDARLVAS GMSAISLSIL HFLSSGDHVV CVDEAYSWAK KFFNYLSRKF
DIKVSYVPPD AEKIVEAITK KTKLIYLESP TSMRMKVIDI RKVTEVAREL KIKTVIDNTW
ASPIFQKPKL LGVDVVVHSA TKYISGHGDV MAGVIAGDSE DMKNIFVDEY KNIGPVLSPI
EAWLILRGLR TLELRMKKHY ENALLVSDFL MDHPKVLEVN YPMNPRSPQY ELASSQMSGG
SGLMSFRLKT DSEEKVKEFV ESLKVFKMAV SWGSHENLVV PRVAYGDCPK EDVNLIRIHV
GLGNPEKLVE DLDQALKKI