| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1499 |
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| Symbol | gatA |
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| ID | 5171539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1487051 |
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| End bp | 1488469 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640564025 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_001245083 |
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| Protein GI | 148270623 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000099116 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGACTTCA GAAGGCTCAC AATAGAAGAC TCCTTGAAAC TCCCTGACGA AGAAAGGGAA
AATCTCCCCC GTCTTTCCTT AGAGGCGATA AAGAAGTTCG ACCCCCACGT GAAGGCGTTC
ATCTCCGTCA AAGAAGACGT CTCCGTGGAA AAGAATGGAA AGTTCTGGGG AATTCCCATC
GCCATCAAGG ACAACATCCT GACCCTCGGA ATGAAAACGA CCTGTGCTTC TAAAATCCTT
GAGAACTACG AATCTGTTTT CGATGCCACC GTTGTGAAAA AACTGAAAGA AGCGGGCTTT
GCCATCGTTG GGAAAGCGAA CCTCGACGAG TTCGCGATGG GATCCAGCAC CGAAAGATCC
GCGTTCTTTC CCACGAGAAA CCCTTGGGAT CTCGAGCGAG TTCCCGGTGG CAGCAGTGGA
GGATCTGCCG CTGCGGTCGC TTCGGGAATG GTCGTTGCGG CGCTCGGAAG CGACACAGGA
GGTTCTGTGA GACAGCCCGC CTCGCTCTGC GGGGTGGTCG GGTACAAACC CACCTACGGA
CTCGTCTCTA GGTACGGCCT TGTGGCATTT GCAAGCTCTC TCGACCAGAT AGGTCCCATC
ACGAAGACGG TGAAAGATGC GGCGATACTT ATGGAAATCA TCTCCGGAAA AGACGAGAAC
GACGCCACAA CGATGGATAG GAAAGTTGAT TTCCTTTCGG AGATCGAAAA CGGCGTCGCA
GGTATGAGAT TCGCCGTTCC GCAGGAGATT TACGAGCACA AGATAGAAGA CGGTGTGGCA
GAGAGATTCG AAGAGTCCCT CAAACTCCTC GAGAAACTCG GTGCGAAGGT GGAAAAGGTC
AGCATCCCGC ACATGAAATA TTCCGTCGCC GTCTATTACG TCATCGCTCC CGCTGAAGCG
AGTTCCAACC TCGCCAGGTT CGACGGTGTC AAGTACGGCC TCAGGGTAAA AGAGAAAGGA
CTCAGAGAGA TGTACATGAA GACCAGAAAC GTCGGGTTCG GTGAAGAAGT TAGAAGAAGG
ATCATGATCG GAACATTCAC CCTCAGCGCT GCCTACTACG AAGCCTATTT CAACAAGGCC
ATGAAAGTGA GAAGAAAGAT CTCCGATGAA CTCAACGAGG TGCTCTCGCA GTACGACGCG
ATCCTCACCC CCACTTCCCC AGTGACGGCT TTCAAGATCG GAGAGATAAA GGATCCTCTC
ACCTACTACC TCATGGACAT CTTCACGATA CCCGCAAACC TCGCGGGACT TCCCGCGATA
AACGTTCCCT TTGGATTCTC CAACAACCTC CCCGTGGGTG TTCAGGTGAT AGGGAAGAGG
TTCGCGGACG GAAAGGTCTT CAGGATAGCA AGGGCCATAG AGAAGAACTC CCCCTACAAC
GAAAACGGCA TGTTCCCGCT CCCGGAGGTG AAAGCATGA
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| Protein sequence | MDFRRLTIED SLKLPDEERE NLPRLSLEAI KKFDPHVKAF ISVKEDVSVE KNGKFWGIPI
AIKDNILTLG MKTTCASKIL ENYESVFDAT VVKKLKEAGF AIVGKANLDE FAMGSSTERS
AFFPTRNPWD LERVPGGSSG GSAAAVASGM VVAALGSDTG GSVRQPASLC GVVGYKPTYG
LVSRYGLVAF ASSLDQIGPI TKTVKDAAIL MEIISGKDEN DATTMDRKVD FLSEIENGVA
GMRFAVPQEI YEHKIEDGVA ERFEESLKLL EKLGAKVEKV SIPHMKYSVA VYYVIAPAEA
SSNLARFDGV KYGLRVKEKG LREMYMKTRN VGFGEEVRRR IMIGTFTLSA AYYEAYFNKA
MKVRRKISDE LNEVLSQYDA ILTPTSPVTA FKIGEIKDPL TYYLMDIFTI PANLAGLPAI
NVPFGFSNNL PVGVQVIGKR FADGKVFRIA RAIEKNSPYN ENGMFPLPEV KA
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