| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1490 |
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| Symbol | |
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| ID | 5171327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1476464 |
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| End bp | 1477711 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640564016 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001245074 |
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| Protein GI | 148270614 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0495802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATCG CGGTGATAGG TGGAGGAAGC AGCTACACCC CGGAGCTGGT GAAGGGACTT
CTCGACATCT CCGAGGATGT TCGCATCGAC GAGGTGATCT TCTACGACAT CGACGAAGAA
AAGCAGAAAA TCGTCGTTGA TTTTGTGAAA AGGCTCGTCA AAGATAGGTT CAAGGTGCTC
ATCAGCGACA CCTTCGAGAG TGCTGTCGTG GACGCGAAGT ACGTGATCTT TCAGTTCAGA
CCCGGCGGAC TCAAAGGTAG AGAAAACGAT GAGGGCATTC CGCTGAAGTA CGGTCTCATA
GGTCAGGAAA CAACAGGGGT TGGGGGATTT TCAGCGGCTT TGAGGGCGTT TCCCATAATA
GAAGAGTACG TTGATACCGT GAGAAAAACA TCGAACGCAA CCATTATAAA CTTCACCAAC
CCATCCGGCC ACATCACGGA GTTCGTGAGA AACTACCTCG AATACGAAAA ATTCATAGGC
CTTTGCAACG TTCCCATAAA CTTCATCCGG GAGATCGCAG AGATCTTCTC AGCAGAGCTC
GAAGACGTGT TCCTGAAGTA CTACGGCCTC AACCATCTGA GCTTCATAGA GAAGGTCTTT
GTAAAAGGTG AAGACGTGAC GGAAAAGGTC TTCGAGAACC TGAAGCTGAG GCTCTCCAAC
ATACCAGACG AAGATTTCCC GGCGTGGTTT TACGACTCGG TGAGGATCAT CGTGAATCCT
TACCTGAGAT ATTATTTGAT GGAGAAAAAG ATGTTCAAAA AGATCTCCTC GCACGAGCTC
AGAGCAAGGG AAGTGATGAA GATAGAGAAA GAACTCTTCG AGAAGTACAG AACCGCTACC
GAGATACCGG AAGAACTCAC AAAGCGCGGC GGCAGTATGT ATTCCACTGC GGCGGCTCAC
CTGATAAGAG ACCTCGAAAC CGATGAAGGG AAGATACACA TAGTGAACAC GAGGAACAAC
GGCTCGATCG AAAACCTCCC GGATGATTAC GTTCTCGAGA TTCCGTGTTA TGTGAGATCC
GGTAGGGTCC ACACGCTCTC GCAGGGGAAA GGAGATCACT TTGCTCTTTC CTTCATCCAC
GCGGTGAAGA TGTACGAACG ACTCACAATA GAAGCGTATC TGAAAAGATC GAAAAAACTC
GCCTTGAAGG CTTTGCTTTC CCATCCACTT GGACCCGATG TGGAGGGCGC GAAAGACCTT
CTCGAAGAGA TACTGAAGGC AAACAGCGAA CACGTGAAAC TGGAGTAA
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| Protein sequence | MRIAVIGGGS SYTPELVKGL LDISEDVRID EVIFYDIDEE KQKIVVDFVK RLVKDRFKVL
ISDTFESAVV DAKYVIFQFR PGGLKGREND EGIPLKYGLI GQETTGVGGF SAALRAFPII
EEYVDTVRKT SNATIINFTN PSGHITEFVR NYLEYEKFIG LCNVPINFIR EIAEIFSAEL
EDVFLKYYGL NHLSFIEKVF VKGEDVTEKV FENLKLRLSN IPDEDFPAWF YDSVRIIVNP
YLRYYLMEKK MFKKISSHEL RAREVMKIEK ELFEKYRTAT EIPEELTKRG GSMYSTAAAH
LIRDLETDEG KIHIVNTRNN GSIENLPDDY VLEIPCYVRS GRVHTLSQGK GDHFALSFIH
AVKMYERLTI EAYLKRSKKL ALKALLSHPL GPDVEGAKDL LEEILKANSE HVKLE
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