Gene Tpet_1413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1413 
Symbol 
ID5171498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp1403175 
End bp1404281 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content47% 
IMG OID640563941 
ProductFeS assembly protein SufD 
Protein accessionYP_001245002 
Protein GI148270542 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01981] FeS assembly protein SufD, group 1 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA CTCTGGTGAT AGAACATGAC GGTGAAAAAG CGGTCGTTTG GGAAACTCCT 
CAGATTTTTT CCGAAAACGA TTACGACTAC GAAGTGCTTG AAAAGGCCCT GGAGAACACC 
GGTGGCCCTC TGAAAGAGTG GAGAAAGAAG AAGTACCAGG AGTACAAAGA ATGGGGATTT 
CCGAGATGGA AAAGGTGTAA TCTCGATGGT ATGTCTCTTC CAGAATTGTC TTTCAAGTGG 
ATAGACCTCG ATGTTGATAT CTCGCTCCTT GAAAGGCTGG ACTTCGAAGG TGCTCACAGG 
AAATTCGTTC TTCTTGGAGA TACGTTCTTT ACGGATTTCA GAGTATACGG CGATGGAAAA 
CACGTGATGA GATTCGACGG AGACGGGATC GAAAACGTAC TCGTGGTCGT CGAAAAAGAG 
GCGGAGATCT ACAAGCTCTC CAGCACGGAT CGATTCAGAA ATACGGTGAT GAGGATCCTG 
GTGAAAAAGA ACGCATCGCT GAAGTTCTTC AATCTGGACT TTTTTGGGAA TTTTTCTTTC 
GACAACGTGT TCATCGTTCT CGAAGAAGGT GCGAGACTCG TGTTGAGGGA TTTCAAAGCG 
TTCGGTTACA GAAAAACCGG GCATATCCTT GTGAAATTGA ACAAATCGAG CAAAGCCGAT 
ATAAAATCCT TCTTCTACCA GAATGGATCA GGAATAACCG ATTTGCTCTA CCTCATGAGA 
TTTGAGGGAG AGGACGCCGA AGGAAAGCTG AAGGGAAATG GTGTAGTGGA TGGCGCTGGA 
AAGATCGTTT TCCGTGGAAT CCTGGATGTG AAAAGAGGTT CTAAGAACAT CGTCGCAGAA 
GAAACAGAAC ACACACTCGT TCTCTCTCCA GACGCCCGAA TGGATGCCAT TCCGAGTCTC 
TGGGTGGACG AGAACGATGT CACCGCTTCA CACTCTGCGA GTTCTTCCTC TCTCGATGAA 
GACGAACTCT TCTATCTGAT GACCAGAGGC GTTGATGAGA TAGAATCCAA GAAATTGATC 
GTGCGAGGGG TGTTCAACGA GCTGCTCGAC GAACTGGACG AGTCGGTGAA GGGAGAGGTA 
GAAGGTGTTG TCAACAAGAT TGTATGA
 
Protein sequence
MEKTLVIEHD GEKAVVWETP QIFSENDYDY EVLEKALENT GGPLKEWRKK KYQEYKEWGF 
PRWKRCNLDG MSLPELSFKW IDLDVDISLL ERLDFEGAHR KFVLLGDTFF TDFRVYGDGK 
HVMRFDGDGI ENVLVVVEKE AEIYKLSSTD RFRNTVMRIL VKKNASLKFF NLDFFGNFSF 
DNVFIVLEEG ARLVLRDFKA FGYRKTGHIL VKLNKSSKAD IKSFFYQNGS GITDLLYLMR 
FEGEDAEGKL KGNGVVDGAG KIVFRGILDV KRGSKNIVAE ETEHTLVLSP DARMDAIPSL 
WVDENDVTAS HSASSSSLDE DELFYLMTRG VDEIESKKLI VRGVFNELLD ELDESVKGEV 
EGVVNKIV