| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1408 |
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| Symbol | |
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| ID | 5171144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1398749 |
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| End bp | 1399759 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563935 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001244997 |
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| Protein GI | 148270537 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.121808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA AGGTGCTTCT TGCTCTGCTG GTAGTTCTGT CGATCTCGAT CTTCGCGAAG
GCCACCCTTT ACATCTACAA CTGGGCCGAT TACATTCCTG AAGACGTGAT CAGAGCATTC
GAAGAGAAAT ACGATTGCCG TGTGGTGTAT GACAACTACG CTTCAAACGA AGAGATGTAC
GCCAAATTCA AAGCCGGTGG TGGAAAAGGC TACGATCTGA TATTCCCTTC CGGTGACTAT
GTTTCGATAA TGAAAAAAGA AGGAATGCTC CAGAAACTCG ATCTTTCGAG GATACCGAAC
TTCAAATATC TAGATAAAGA CATTCTCACA AAGACCACTT ACGATCCCAA CCATGAGTAC
AGCATTCCTT ACATGATGGG ATCCACTGTT GTTATTGTGA ATAAAAAATA CGTGAAAGAG
TACGAGAAGT CCTGGTCCAT CTTCGATAGA GAAGACCTCA GGGGAAGAAT GACTCTCCTC
GATGACATGA GGGAAGTCCT CGGCGCTGCC TTGAAGTATC TCGGATACTC CGTCAACACG
AAGAACCCGA AAGAACTGGA AGAAGCGAAA CAGGTTGTTC TCAGATGGAA AAAGAACATA
GCCAAATTCG ACGCCTCTTC GTACGCTGAT GGTGTTGTTT CCGGTGAGTA CTGGGTGGTG
CACGGATACG CAGAAGACGT CTATCAAAGA ATACCCGAAG GAGAGGAAGA ATACTTCGAC
TTCTTCATAC CAAAAGAAGG CGGTACGTTG TGGATCGACA ACATGGTGAT CCCCAAAGGG
GCAAAGAACG TGGACCTCGC CTACAAGTTC ATCAACTTCA TTCTCGAGCC AGAAAACGCA
GCGAAGATAG CGGATTATCT CGGTCTTCCC TCACCGAACG TGGAAGCCAG AAAGTACATG
CAGACAGAAC CCATTTACAC CATAGAAGAT CTCAAAAACT GTGAATTCAT AGAAGACGTG
GGAGAAGCCC TCGAACTTTA CAACAAAATA TGGCTCGAGA TCATCATGTG A
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| Protein sequence | MMKKVLLALL VVLSISIFAK ATLYIYNWAD YIPEDVIRAF EEKYDCRVVY DNYASNEEMY
AKFKAGGGKG YDLIFPSGDY VSIMKKEGML QKLDLSRIPN FKYLDKDILT KTTYDPNHEY
SIPYMMGSTV VIVNKKYVKE YEKSWSIFDR EDLRGRMTLL DDMREVLGAA LKYLGYSVNT
KNPKELEEAK QVVLRWKKNI AKFDASSYAD GVVSGEYWVV HGYAEDVYQR IPEGEEEYFD
FFIPKEGGTL WIDNMVIPKG AKNVDLAYKF INFILEPENA AKIADYLGLP SPNVEARKYM
QTEPIYTIED LKNCEFIEDV GEALELYNKI WLEIIM
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