| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1403 |
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| Symbol | |
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| ID | 5171538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1394103 |
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| End bp | 1394771 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640563930 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_001244992 |
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| Protein GI | 148270532 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.295774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCCTCACC TCTTCTACGG AACGGCTCAA AACGGTGAGG TGATATTCGA CGAAAGGGAA
ACACACCACA TGAGGGTCGT GCGCTTAAAA GAAGGAGATG TGATCGAAGC AACAGATGGA
AAAGGCTTTT CATACACGTG CATTCTTGAA AGCTTGAAGA AAAAAGTAGC TACAGCCAGG
ATCGTAAAGG CAGAAGAGAA AGAAAAAAAA TCTGCTGAGA AATTGAGCGT TGTTGTTCCG
ATCGGCAGGT GGGAAAGAAC ACGTTTTCTC ATAGAAAAGT GTGTTGAACT CGGGGTGGAT
GAGATCTTTT TCCACAAGTT CGAAAGATCC CAGCACGAGA TCAGCCTGGA TAAGACAAAA
ATTGTTGTTA GAGAATCAGC AAAGCAGTGC AGAAGATATC TTTTTCCAAA GGTGAGTTTC
CTGGAGAAAC TGGAACTCAG CGGAAACGTG ATAACACTGG ATCTGGATGC CTCTCAAAAC
CTGCTCGACG TGAACTTAGA AGGCTCGATA ACGGTGGTGG TCGGCCCCGA GGGAGGGTTC
TCTGAGAAAG AAAGAGAACT GCTGAGGTCT TCCACAACCG TTGTTAGTCT TGGGAAGAAA
ATCCTCAGAT TCGAAACAGC TGCGATATTG ACCGTTGGAT ACATCGCTTT AAAAAAACAA
AAAATCTGA
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| Protein sequence | MPHLFYGTAQ NGEVIFDERE THHMRVVRLK EGDVIEATDG KGFSYTCILE SLKKKVATAR
IVKAEEKEKK SAEKLSVVVP IGRWERTRFL IEKCVELGVD EIFFHKFERS QHEISLDKTK
IVVRESAKQC RRYLFPKVSF LEKLELSGNV ITLDLDASQN LLDVNLEGSI TVVVGPEGGF
SEKERELLRS STTVVSLGKK ILRFETAAIL TVGYIALKKQ KI
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