| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1317 |
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| Symbol | rpsM |
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| ID | 5170233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1314570 |
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| End bp | 1314947 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640563842 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_001244907 |
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| Protein GI | 148270447 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000394298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCGTA TCGTAGGTGT TGAGCTTCCA AACAACAAAA AGGTCTGGGT GGCGCTGACC
TACATCTATG GAATTGGAAG GAGCAGATCC TTTGAAATTT TGAAAAACAC TGGTATAGAT
CCGGAAAAGA GAGTGGGAGA CCTCACCGAT GAGGAGATCA GCAAGATCAC CAAGTACATC
CAGGATCATT TCAAGGTAGA AGGAGAACTC AGAAGCGAGG TTGAAAGAAA CATCAGACGA
CTCATAGAGA TAGGGTGTTA CAGAGGTATC AGACACAAAC TTGGGCTCCC CGTTAGAGGT
CAAAAGACCC GATCAAACGC AAGGACAAGA AAAGGACCCA GACCGAGCAG AATAAAGACC
AAAAAGAAGT CTTCATAA
|
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| Protein sequence | MARIVGVELP NNKKVWVALT YIYGIGRSRS FEILKNTGID PEKRVGDLTD EEISKITKYI
QDHFKVEGEL RSEVERNIRR LIEIGCYRGI RHKLGLPVRG QKTRSNARTR KGPRPSRIKT
KKKSS
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