| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1279 |
|---|
| Symbol | |
|---|
| ID | 5171214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1290287 |
|---|
| End bp | 1291543 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640563804 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001244869 |
|---|
| Protein GI | 148270409 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1323] Predicted nucleotidyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000141845 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGTACA ATCCATTCCA CAACGGACAC CTCTATCATC TTACTTCGGC CAGAGAGCTC
GTGAGACCGG ACTACACGAT CGCTGTGATG AGCGGTAATT TCTGCCAGAG AGGTGAACCA
GCCGTCATAG ATAAATTCGC GCGGGCAGAG ATCGCTCTCA GAATGGGAAT AGATGTTGTT
CTGGAACTAC CCGTTGTTTT TGCCACACAG GATGCCGGAG GATTTGCTTT CGGTGCGGTG
AGCGTGTTGG ATGCAACGGG TGTTGTCACA GATGTGGTCT TTGGAAGCGA ATCAAACGAC
ATCGGGTTTC TTCAAAGAGT AGCGCAAATT CTTTACGAGC AACCCGACGA ATACCAGAAG
TTTTTGCATG AAGAGTTGAA AAAAGGCTAC TCTTTCCCCA ATGCCAGAAA GTACGCTCTG
ATGAGGTATT TTTCCATGAA AGGTTGGAAC GAGGAAGAAG TCCTGAGGCT CGAAAAGTCG
AACGATATCT TAGGGGTGGA GTACATTCAT TCTGCTCTGA AGATAGGTTC TAACATCAGA
TTCCACACGA TAAAAAGGGT AGGAGCGGAG GAGAAAGACA CCAGTTTCAG GGGACGATTC
TCCAGTGCAA CGGCGATAAG AAACCTTATA AGAGAAGAAA GGTGGGAAGA AGTGAGAGAT
TCTCTTCCAG AAGATTCTTT TGAGATCCTC ATGAGGGAGA TAAACGAAGG GCGTGGACCC
GTTTTCCTCG AGAATATGGG AGATTTTCTC CTTTCATTTT TCAGACTGAA AAACATGGAG
TTCTTCGAGA GAATCCATGG TTTTTCCGAG GGACTCGAAA AGAGGTTTCA CATCTGTGCC
AGACAAACAG GATCTTACCA AGATTTTCTG GAGTGTGTCA AAGCCAAGCG TTTCACCTTT
TCTCGAATAA GAAGACTCGC TCTCTTTTCG GTGTTCGAGG TGAACAAAGA ATTCGTTGAA
AAAAGCAACG CAAAGGGGCC TCAGTACATC AGGATCCTTG GATTCACAGA GAAGGGAAGG
AAAATCCTTT CTCTCATGAG AAAGAAGGCA AAACTTCCGA TCGTAACGAA CATGTCCCTC
TACAGGAAAG TTCTGGAGAA AACAGACCTA CCAGTTGATA AACAACTCTT TTTTGAACAG
ATCGATCTCG ACGTGAGGAC GACGAACTTC TACTCGATGT TCTTTCCAGC GGTGGAACAG
CGCTGTGGAG AACGAGACTT TTCCATTCAT CCCATCTTTC TGAGAACGGA GACATAG
|
|---|
| Protein sequence | MEYNPFHNGH LYHLTSAREL VRPDYTIAVM SGNFCQRGEP AVIDKFARAE IALRMGIDVV
LELPVVFATQ DAGGFAFGAV SVLDATGVVT DVVFGSESND IGFLQRVAQI LYEQPDEYQK
FLHEELKKGY SFPNARKYAL MRYFSMKGWN EEEVLRLEKS NDILGVEYIH SALKIGSNIR
FHTIKRVGAE EKDTSFRGRF SSATAIRNLI REERWEEVRD SLPEDSFEIL MREINEGRGP
VFLENMGDFL LSFFRLKNME FFERIHGFSE GLEKRFHICA RQTGSYQDFL ECVKAKRFTF
SRIRRLALFS VFEVNKEFVE KSNAKGPQYI RILGFTEKGR KILSLMRKKA KLPIVTNMSL
YRKVLEKTDL PVDKQLFFEQ IDLDVRTTNF YSMFFPAVEQ RCGERDFSIH PIFLRTET
|
|---|
| |