Gene Tpet_1252 details

Gene Information

• Locus tag: Tpet_1252
• ID: 5170372
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 1268126
• End bp: 1268725
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640563777
• Product: flagellar L-ring protein
• Protein accession: YP_001244842
• Protein GI: 148270382
• COG category: [N] Cell motility
• COG ID: [COG2063] Flagellar basal body L-ring protein

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAAAGA TATCAATCGT GCTGTTGATC GTTTTCGTAA CAAGCATTTT CCCCTTCTCA 
ATTTGGAACT CTGCGGGCGA ATCCGAGTAC AAAAATCTCC TTTCCATACA GAAAGCCTCG 
AAGGTTGGAG ACATCCTCAC CATCGTGATC CGGGAAAGCA ACAACGTGTC TTCGGAGAGG 
GAAAGTCTCG AGATCCAGAA AACCCTTTTG AACATCTTGG GAAACGTTGT GAACGCAGCC 
GCAGGTGTCA ACCTCAACAA CTTCATTCCT ATAAACAACA ACTCTCCTGA GAGACAGCGC 
GGTGGAAAGG TGCAGTCTTC CGTCGTGGCG AAGATCTCGG CAGTGGTCGT CGACATCGAT 
CCCTACGGTA ACCTCGTGGT GGAGGGAAGA AAAACGATAA AGGTGGACAA GGACTATCAG 
GAAATCATCG TGAAAGGAAA AGTGAGGCCA GACGACATAG AGATAGGAAA CGAGGTGGAT 
TCCTCCAAGC TTGCAGATTC CGAGATATGG GTGAACGGGA AACTCGTTTT CAGCGAGGAA 
CCCGGAAAAG AGAGTTTCTT CGACAAGATA CTCGCGTTCT TAGCAGGACT CTTCACATGA 

 

Protein sequence

MKKISIVLLI VFVTSIFPFS IWNSAGESEY KNLLSIQKAS KVGDILTIVI RESNNVSSER 
ESLEIQKTLL NILGNVVNAA AGVNLNNFIP INNNSPERQR GGKVQSSVVA KISAVVVDID 
PYGNLVVEGR KTIKVDKDYQ EIIVKGKVRP DDIEIGNEVD SSKLADSEIW VNGKLVFSEE 
PGKESFFDKI LAFLAGLFT