| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1213 |
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| Symbol | prfB |
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| ID | 5170632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1231878 |
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| End bp | 1232981 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563737 |
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| Product | peptide chain release factor 2 |
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| Protein accession | YP_001244803 |
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| Protein GI | 148270343 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1186] Protein chain release factor B |
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| TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000166431 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCAGTT TTGAGACCAG AACAAGGATG GAGGAACTTG AAAAAAAGTA TAAGGACATA
CTTTCTGTGG TTAATGAAAA TGAAGTTGAC AGGGAAATCG AAGAAATAGA AAAAAAGCTC
ACAGATCCAT CGGTATGGGA TGATCAAAAA AAGGCGCGTG AGTACACCCA GAAACTGAAG
AGGTTGAAGA ACATCTCTGA AGATTTGAAG AGAGTGAGAT CTCTGTTCGA AGATCTGGAA
GTTGCCATAG AACTTTCCGA CGAGGATCAG GAGATGGCTC AGCACGTGGA AGAAATAGTT
CAGGAGCTGG AAGGTGCCGT CAAAAAACTG GAACTTGAGA TCATTCTGAA CGGAAAATAC
GATCCGAACA ACGCTTATCT GTCGGTCCAT CCAGGTGCGG GTGGTACCGA GTCTCAAGAC
TGGGCGCAGA TGCTTCTCAG AATGTACATG AGGTGGGCAG AGAGAAAAGG TTTCGATGTT
GAGATTGTGG AGTTCCAACC GGGAGAAGAG GCCGGTATCA AGGATGCCAC GATTCTCATA
AAAGGTGAAT ACGCTTACGG TTACTTGAAA CACGAATCCG GTGTTCACAG ACTGGTCAGG
ATCTCACCCT TCGACGCGGC CAGAAGAAGG CACACTTCTT TCGCCTCTGT GAATGTGATT
CCGGAAATAG ATGACGACGT GGATATAGAG ATCAGACCGG AAGATCTAAA GATAGAAACC
TTCAGAGCTT CTGGACACGG TGGACAGTAC GTCAACAAAA CCGAATCTGC CGTGAGAATC
ACGCATCTGC CAACTGGGAT TGTGGTCTCC TGTCAAAACG AAAGATCGCA GCACCAGAAC
AAACAAACCG CGCTGAAGAT ACTCAAGGCG AAACTGTACC AACTCGAGAT GGAAAAAAAG
CAAAGAGAAA TACAGGAGAT TCAGGGAGAG CTCAAAGACA TTTCCTGGGG AAACCAGATA
AGATCTTACG TTTTTCATCC GTACACGATG GTCAAGGATC ACAGAACCGG AGTAGAAACG
GCAAACGTTG ACGCCGTTAT GGATGGAGAT ATAGACATGT TCATAGAAGC TGAACTGGTC
TATTTTGCAC GCCGATCAGG TTAA
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| Protein sequence | MISFETRTRM EELEKKYKDI LSVVNENEVD REIEEIEKKL TDPSVWDDQK KAREYTQKLK
RLKNISEDLK RVRSLFEDLE VAIELSDEDQ EMAQHVEEIV QELEGAVKKL ELEIILNGKY
DPNNAYLSVH PGAGGTESQD WAQMLLRMYM RWAERKGFDV EIVEFQPGEE AGIKDATILI
KGEYAYGYLK HESGVHRLVR ISPFDAARRR HTSFASVNVI PEIDDDVDIE IRPEDLKIET
FRASGHGGQY VNKTESAVRI THLPTGIVVS CQNERSQHQN KQTALKILKA KLYQLEMEKK
QREIQEIQGE LKDISWGNQI RSYVFHPYTM VKDHRTGVET ANVDAVMDGD IDMFIEAELV
YFARRSG
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