Gene Tpet_1188 details

Gene Information

• Locus tag: Tpet_1188
• Symbol: pyrH
• ID: 5170843
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 1209526
• End bp: 1210221
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640563707
• Product: uridylate kinase
• Protein accession: YP_001244778
• Protein GI: 148270318
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0528] Uridylate kinase
• TIGRFAM ID: [TIGR02075] uridylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00153255
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAGTAC TGGTGAAGCT GAGTGGGGAA GCACTCTCGG GAGAAGGAGG CAGAGGCTTC 
GATCCAGAAA GGGTGAACTA TATAGTTACA GAGATCAAAA GCGTCGTTGA AGAGGGTTTC 
AAAATAGGTA TCGTTGTGGG AGCAGGAAAT CTTTTCAGGG GTGTCGAGCT GAAGAATCTC 
ACCATGGCAA GGGCCGATCA GATCGGTCTT CTCGGGACGG TGATGAATTC CGTATATTTG 
AAAGACATCT TCGAAAGATC CGGATTGAAA GCTCGAATTT ATTCACAGAT AGTGAATCTT 
CCGGATGTGG AAAGGGTGAA CTACGATTCT ATAGAATCTG CCCTAAGAGA AAACAGCATT 
CTGATCTTCG CTGGAGGTAC GAGCAATCCA TTTTTCACAA CGGACACGGC AGCCGTTCTG 
AGAGCCCAGG AGATGAAAGC AAAACTGGTG GTGAAAGCCA CAAAAGTGGA TGGTGTGTAC 
GATAAAGACC CAAAGAAATT TCCCGATGCT AAGAAGATCC CTCATCTCAC GTTCTCAGAA 
GCGATGAAAA TGGGGCTCAA GGTCATGGAC GCCGAAGCCT TCGCACTGTG TAAGAAGCTT 
GGGATCACAG TGAAAGTGAT CAATTTCTTC GAACCAGGAA CTCTTCTGAA AGCGCTGAAG 
GGAGAAGACG TGGGAAGCAC CGTTGTTCCA GATTAA 

 

Protein sequence

MRVLVKLSGE ALSGEGGRGF DPERVNYIVT EIKSVVEEGF KIGIVVGAGN LFRGVELKNL 
TMARADQIGL LGTVMNSVYL KDIFERSGLK ARIYSQIVNL PDVERVNYDS IESALRENSI 
LIFAGGTSNP FFTTDTAAVL RAQEMKAKLV VKATKVDGVY DKDPKKFPDA KKIPHLTFSE 
AMKMGLKVMD AEAFALCKKL GITVKVINFF EPGTLLKALK GEDVGSTVVP D