| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1186 |
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| Symbol | |
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| ID | 5171570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1207499 |
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| End bp | 1208863 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640563705 |
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| Product | ribonuclease |
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| Protein accession | YP_001244776 |
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| Protein GI | 148270316 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00382378 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGATG GTGAACTCGA AGAGATCTTT TTTGATGAGA TAGAAACGAT CGCGGGGAAA
ATTTACCTTG GAAAGATCGA AAAAATCGTA CCAGGACTCG AAGCGGCTTT CGTGAAGATT
GGAAAGGGCA GGAACGCCTT TTTGAAACTC AGTGAGATAA ACGAGGTCTA CAGGGAAACT
ATTCTGAAAG AACAGGAAGT GAAAGAGGGT CAGAAGATAC TCGTACAGGT AAAAAAGGAT
GCTTCGGGGA AAAAAGGACC TCAGGTAACA ACTCAGATAG GAATAGCCGA TAGATTCGTT
GTCATATTTC CTTTCAAAAA AGTGATAGGT GTCTCAAGAA AGATAGAAGA TGCTTCGGAA
AGGCGTAGGT TGAGAACTAC AGCTTTTTCT CTGAGGAAGA GACACGGTGT CGGTGTAATA
GTGAGAACAG CAGCAGAAGG TGTGGACGAA GAGGAGATCA TAAAGAATTT TGAAAGGGCA
TTAGAAAAAT GGAACCAGGT ACTTCAAAAG TTCAGAAGGT CGAGAAAACC GAAATTGCTA
CACGAAGAAG ACCCTGTAGA ACAGATCATC AAAGAAAAGG TGAATTCGAA GATAGACAGG
TTGATTTACA ACAATAGATC ACTCCTTGAG ACTTTGCAGA AATATCTTCA AAATCTTCCA
AAAAAGCCGG AACTCGAGTA CGTAGAAGGT GATTTGTTTG AAAAATTCTC TGTTTACGAA
CGTATGAAAA AACTCCTTTC TCGCACCGTT CAATTGAAAA GTGGCGGAAA CATCGTCATA
GATCGAACAG AAGCACTCAC CGTCATAGAT GTAAACTCGG AAAGCTACAC AGACGCTGAA
AACCAGGAGG AACTCGCTTT GAAAACGAAC ATGGAGGCCA TCGAAGAAAT CGTTCGTCAG
TTGATACTCA GAAACATTGG AGGAATCGTG GTAATAGATT TCATAAAGCA GAAAGATCCG
AAGAGTTATG AAAAGCTTCT TTCACGATTC AAAGAGGTTG CAAAAAGAGA CGGAACAAGA
ATCGAAATCT TTGGATTCAC AAATCTTGGG CTTCTGGAAA TAACAAGAAA AAGAACGACA
AGACCTCTGG ATACACTTCT TTTCACCCGG TGCCCCGTGT GTTCGGGAAC AGGGAAGGTG
CTTTCTCAAA AGATCCTGCT CAAGAGGATC AGAGAAGATT TGAAAAAATT GAAGAATTTT
GAGGAAGTAA CATTGAAAGT TCATCCGAAC ATGTCTGGAT ACTTCAAAAG GGAAGATATA
AAAAAGCTCC AGAAGGAATT CAAAGTAAAA CTGAACCTGG ATTATGGCTG GCATGATCCA
AATTCTTACG AGATCAAGGC GAAGACCAAG AAAGGAGGAA AGTGA
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| Protein sequence | MDDGELEEIF FDEIETIAGK IYLGKIEKIV PGLEAAFVKI GKGRNAFLKL SEINEVYRET
ILKEQEVKEG QKILVQVKKD ASGKKGPQVT TQIGIADRFV VIFPFKKVIG VSRKIEDASE
RRRLRTTAFS LRKRHGVGVI VRTAAEGVDE EEIIKNFERA LEKWNQVLQK FRRSRKPKLL
HEEDPVEQII KEKVNSKIDR LIYNNRSLLE TLQKYLQNLP KKPELEYVEG DLFEKFSVYE
RMKKLLSRTV QLKSGGNIVI DRTEALTVID VNSESYTDAE NQEELALKTN MEAIEEIVRQ
LILRNIGGIV VIDFIKQKDP KSYEKLLSRF KEVAKRDGTR IEIFGFTNLG LLEITRKRTT
RPLDTLLFTR CPVCSGTGKV LSQKILLKRI REDLKKLKNF EEVTLKVHPN MSGYFKREDI
KKLQKEFKVK LNLDYGWHDP NSYEIKAKTK KGGK
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