| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1156 |
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| Symbol | |
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| ID | 5170118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1180876 |
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| End bp | 1182024 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640563675 |
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| Product | nuclease SbcCD, D subunit |
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| Protein accession | YP_001244746 |
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| Protein GI | 148270286 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGGAGC TCAGAATACT CCACACGTCC GACTGGCACC TCGGTGTCAC CTCGTGGACC
AGCTCGCGAC CAGTAGATCG ACGTGAAGAG CTGAAGAAAG CGCTCGATAA AGTAGTCGAA
GAAGCCGAAA AGAGAGGGGT CGATCTGATT CTTCTAACGG GTGATCTTCT TCATTCGAGG
AACAATCCTT CGGTTGTCGC TCTGCACGAT CTTCTGGATT ATCTGAAGAG GATGATGAGA
ACAGCGCCTG TGGTAGTACT TCCTGGAAAC CACGACTGGA AGGGCTTGAA ACTCTTTGGA
AATTTCATAA CATCGATCTC GAGTGACATA ACCTTTGTCA TGTCCTTCGA ACCTGTGGAT
GTAGAAGCCA AACGGGGCCA GAAGGTGAGA ATTCTCCCCT TCCCGTATCC TGACGAGTCG
GAAGCTTTGA GAAAAAACGA GGGAGACTTC CGGTTCTTCC TCGAATCCAG ACTCAACAAA
CTTTACGAAG AAGCGCTGAA GAAGGAAGAT TTCGCTATCT TCATGGGTCA CTTCACTGTT
GAAGGGCTCT CGGGTTATGC TGGAATCGAG CAAGGAAGAG AGATCATTAT AAACAGAGCG
TTGATTCCGT CGGTGGTTGA TTACGCTGCG CTCGGGCACA TTCATAGTTT CCGAGAGATT
CAGAAGCAAC CTCTCACCAT ATACCCTGGC TCTCTCATAA AGATAGATTT CGGAGAAGAA
GCGGACGAAA AAGGAGCGGT CTTTGTTGAG CTGAAAAGAG GAGAACCGCC CAGGTATGAA
AGAATAGACG TCGCCCCTCT TCCGTTGAAA ACTCTCTACT ACAAAAAGAT AGACACCTCT
GCTCTGAGAA GCATAAGGGA TTTCTGCAGG AATTTTCCTG GTTACGTGAG GGTGGTTTAT
GAAGAAGACT CCGGTATTCT TCCCGACCTG ATGGGAGAGA TAGATAATCT GGTGAAGATA
GAAAGAAAGT CAAAAAGAGA GATAGAAGAG GTGCTTCGAG AAAGCATGGA AGAGTTCAAA
GAAGAGCTGG ACAAAATTGA TTACTTCGAA CTCTTCAAGG AGTATTTGAA GAAGAGAGAA
GAAAACCACG AAAAGCTGTT GAAAATCCTG GATGAGCTTC TCGATGAGGT GAAAAAGAGT
GAGGCCTGA
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| Protein sequence | MKELRILHTS DWHLGVTSWT SSRPVDRREE LKKALDKVVE EAEKRGVDLI LLTGDLLHSR
NNPSVVALHD LLDYLKRMMR TAPVVVLPGN HDWKGLKLFG NFITSISSDI TFVMSFEPVD
VEAKRGQKVR ILPFPYPDES EALRKNEGDF RFFLESRLNK LYEEALKKED FAIFMGHFTV
EGLSGYAGIE QGREIIINRA LIPSVVDYAA LGHIHSFREI QKQPLTIYPG SLIKIDFGEE
ADEKGAVFVE LKRGEPPRYE RIDVAPLPLK TLYYKKIDTS ALRSIRDFCR NFPGYVRVVY
EEDSGILPDL MGEIDNLVKI ERKSKREIEE VLRESMEEFK EELDKIDYFE LFKEYLKKRE
ENHEKLLKIL DELLDEVKKS EA
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