| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1121 |
|---|
| Symbol | |
|---|
| ID | 5170116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1147167 |
|---|
| End bp | 1147427 |
|---|
| Gene Length | 261 bp |
|---|
| Protein Length | 86 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640563638 |
|---|
| Product | FlhB domain-containing protein |
|---|
| Protein accession | YP_001244711 |
|---|
| Protein GI | 148270251 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2257] Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB |
|---|
| TIGRFAM ID | [TIGR00789] flhB C-terminus-related protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000111049 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATACGG ATGAGATAAA AAAAGCAGTG GCTTTGAAAT ACGATCCCTC CAGAACGAGT
GCACCTGAGG TTGTGGCAAA GGGTGTGGGT GAAGTTGCAG AAAGGATAAT CGAGGTGGCC
AAAAGGTATG GCATACCAAT AGAAGAAAGG CCGGATATCA TAGACGATCT TTTGAGACTT
GATCTTTTCT CAGAGATTCC TGAAGAGATG TACCTTGTAA TCGCTGAGAT ATACGCCTTT
CTGAAAAGAT ACGACAAATG A
|
|---|
| Protein sequence | MHTDEIKKAV ALKYDPSRTS APEVVAKGVG EVAERIIEVA KRYGIPIEER PDIIDDLLRL
DLFSEIPEEM YLVIAEIYAF LKRYDK
|
|---|
| |