Gene Tpet_1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1014 
Symbol 
ID5171339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp1042386 
End bp1043048 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content46% 
IMG OID640563532 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_001244608 
Protein GI148270148 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAA TAGCAGCTTC AATTCTCGCA TGTGACCTTG CAAGACTGGC CGATGAAGTG 
AAAAGAGTGG AGGAGCACGT GGATATGATC CATTTCGATG TCATGGATGG TCACTTTGTT 
CCAAACATTT CCTTTGGACT TCCCGTTCTG AAAGCCCTCA GGAAAGAAAC AAAACTTCCC 
ATAAGTGTAC ATCTGATGAT CACCAATCCC GAAGATTACA TCGACCGCTT CATAGAAGAA 
GGCGCAGATA TGGTTGCCAT CCATTACGAA TCGACCTTTC ATCTCCACAG GTTGGTCCAT 
CGTGTTAAAG ACCTTGGAGC ACAGGCCTTT GTTGCCATAA ATCCGCATAC CCCCATCAAT 
CTTCTTTCAG AGATCATAAC CGACGTCGAT GGTGTACTGG TGATGAGCGT CAATCCCGGT 
TTCTCTGGTC AGAGGTTCAT AGCAAGGAGT CTTGAGAAAA TAAGAAACCT GAGAAAGATG 
GTGAAAGAAC TGGGACTGGA AACGGAAATC ATGGTCGACG GCGGTGTAAA CGAAGAGAAC 
GCATCGATAC TGGTTAAAAA CGGTGCGACG ATCCTTGTGA TGGGATACGG TATCTTCAGA 
AACGACAATT ACGTTGAACT GATAAAGAGC ATCAAACAGG AAAGAGAGGA ATCTGCTGAC 
TGA
 
Protein sequence
MAKIAASILA CDLARLADEV KRVEEHVDMI HFDVMDGHFV PNISFGLPVL KALRKETKLP 
ISVHLMITNP EDYIDRFIEE GADMVAIHYE STFHLHRLVH RVKDLGAQAF VAINPHTPIN 
LLSEIITDVD GVLVMSVNPG FSGQRFIARS LEKIRNLRKM VKELGLETEI MVDGGVNEEN 
ASILVKNGAT ILVMGYGIFR NDNYVELIKS IKQEREESAD