| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0958 |
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| Symbol | |
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| ID | 5170583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 986523 |
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| End bp | 988265 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640563476 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_001244552 |
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| Protein GI | 148270092 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT CACTGACACT GTTTTTGGTT CTCATATCGA TCCTGATTTT CTCTCAAACG
CTCAAACTCG AAAAGGTGCT GGGATTCAGC GATATTTCAT CTTTAACGAT CAAAGATGGT
TATCTCTTAC TTGGAACGGG AAACGGTGAA ATCATCGTTT ACAAAGGTGG ATCCTATTAC
AAGGTCTTCA AAGTCCACGA CAACAGAGTA AACGAAGTGA CTTTTGAGAA CGGTTTTATC
GTGAGCGCTT CAGACGACAA AACAGTTGGT GTAACGAACC TGGAGACAGG TGAAACACAT
CTTCTCAAAG GTCACGTGAA AGGTGTCTCT TCTGTTGCTG TGACGGGCAA TAAAATCCTG
AGCGCTTCTT TCGATGGAAC GGTGAGAGTA TGGTCTTTCC CAGATGGAAA AGAAATTTCT
TCTCAAAGAC TTGGACCATC GGTTGTTAAA ATCGCCGCCC ATGAGAATAG ATATGTCATG
GGGCTGGCCA ACGGACTTGC ACTGATCAGC GACATCTCGA ATCCCTCATT TTCCATTCCC
CTCAAGGCCC ATCCCGAGGG AATCAAAAAG ATCGTGTTCT CAGAGAATGG ACAGTTGATC
GCAACCTGTG GAGGAAACAC CGTAAAGGTA TGGAACGCTT CGAATGGAAG ACTCGTTCTC
CAGTACGACC ACGTCATAAC GGTGAATGAT GTGGCTTTTC TTGACAATGA CAATCTCATT
TTTGTAACCG ACGATTACAA AGCCGTGGTT TTGAACATTC AGAAAAACGA AGTGGTGAAA
TCAATCGACG CTCATAACAA CTTCGTTCTT TTCGTCTCTT CAGATGACGG TAGCATAGCA
ACCTACGGAA TGGACAAAAC TGTCAAAGTG TGGAATGCCG ATCTGGAGCT TCAGTACTCT
CTCTACGGTC ACCAACTCTC GGTGAACACA GTAGCTTTAT CAAGCGACGG GAAATTCATC
GTGAGCGGCA GTGACGATAG AGAAATTCTG ATATGGAACG CTGAGAAGGG GATCGCTGAA
CACAGGATAA AGGCTCTATC AGGGGTCAGA AAGCTTTTGA CAGTAGAAAA CAACATCATT
TCCTGTCTTG ATAGCAATCA ACTCAAGATT TATAACCTGG AAAATGGAAA GCTCGTGAAG
AGAATCAAAG TTGGCACGAC GAGCACAATG GACATCGCTC TTCAAAACGA TAGAATGGCA
ATAGGATTCT ACGACGGAAG TGTCGCTCTG TTCAGATATC CAACCTTCGA AGAGATATGG
AGAAAAGACA CAGAACACGA AATGATCCAA ACGATTGATA TGAACAACAA ATTCATCGCC
TTCGGAGTTT CTTACTCTGA TCCAAAAGAC AAGATAGGTT ACGTAGAAGT TCTCTCCGCA
GACACAGGGG AAAGAGTACT TCTGCTGGAA GGTCACAGAG GAAACGTAAA CGCTGTGAAA
TTCGCTGGGG ACTTTCTTGT CTCAGGTGGA GAAGACGGAA AGGTCATTCT CTGGAGCTTG
GATACAGGTT CAAAAGTCCG CGAGATCTAC CTGAACGAAC CAGTGTCCTC TCTATTAATC
GATGAAAAGG AACTCTTTGT TGGAACCTGG AATGGAAATA TCAAAATTTT TGCTTTTCCA
GATCTGACCT TGAAGACTTC TTTGAAAGCC TCTGATCAAA AGATAGGACA TTTCATAAAG
GTGGGCGATC AGCTCGTAGT TCCATGCGGT GATGGAAAGA TAAGGATCCT CTTGGAAAAG
TGA
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| Protein sequence | MKKSLTLFLV LISILIFSQT LKLEKVLGFS DISSLTIKDG YLLLGTGNGE IIVYKGGSYY
KVFKVHDNRV NEVTFENGFI VSASDDKTVG VTNLETGETH LLKGHVKGVS SVAVTGNKIL
SASFDGTVRV WSFPDGKEIS SQRLGPSVVK IAAHENRYVM GLANGLALIS DISNPSFSIP
LKAHPEGIKK IVFSENGQLI ATCGGNTVKV WNASNGRLVL QYDHVITVND VAFLDNDNLI
FVTDDYKAVV LNIQKNEVVK SIDAHNNFVL FVSSDDGSIA TYGMDKTVKV WNADLELQYS
LYGHQLSVNT VALSSDGKFI VSGSDDREIL IWNAEKGIAE HRIKALSGVR KLLTVENNII
SCLDSNQLKI YNLENGKLVK RIKVGTTSTM DIALQNDRMA IGFYDGSVAL FRYPTFEEIW
RKDTEHEMIQ TIDMNNKFIA FGVSYSDPKD KIGYVEVLSA DTGERVLLLE GHRGNVNAVK
FAGDFLVSGG EDGKVILWSL DTGSKVREIY LNEPVSSLLI DEKELFVGTW NGNIKIFAFP
DLTLKTSLKA SDQKIGHFIK VGDQLVVPCG DGKIRILLEK
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