| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0899 |
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| Symbol | |
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| ID | 5170678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 919760 |
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| End bp | 921685 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640563417 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001244493 |
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| Protein GI | 148270033 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGGC TGGTTTTCGC TCTGCTTCTC TTTCCTGTTT TCATTCTGGC TCAAAACATC
CTTGGCAACG CTTCTTTCGA TGAACCAATC CTCATCGCAG GTATGGATAT AGACCCACCC
GCAGAGGATG GTTCCATAAA CACAGAAGGA AACTGGGTAT TCTTCACCAA TTCAAACGGT
GAGGGAACGG CTCGAGTTGA AAACGGCGTT CTCGTGGTTG AGATAACAAA CGGAGGAGAT
CACACCTGGT CGGTTCAGAT CATACAGGCT CCCATACGTG TTGAGAAACT CCACAAGTAC
AGAGTTTCTT TCCGAGCCAG AGCTTCCTCT CAAAGGAACG TTGGAGTGAA GATAGGCGGA
ACAGCTGGAA GAAGCTGGGC TGCGTACAAT CCCGGTACCG ACGAATCCGG CGGCATGGTC
TTCGAGCTTG GAACGGACTG GCAGACGTAC GAGTTCGAAT TCGTCATGAG ACAGGAGACC
GATGAAAATG CTCGTTTCGA GTTTCAGCTT GGAAGGTATA CCGGCACGGT CTGGATAGAC
GACGTAGTGA TGGAGGACAT CGGTGTTCTC GAGGTAAGCG GTGAGGAAAA CGAAATCTAC
ACCGAGGAGG ATGAAGACAA AGTGGAAGAC TGGCAGCTCG TTTGGAGTCA GGAGTTCGAT
GACGGTGTTA TCGATCCGAA CATCTGGAAC TTCGAGATAG GAAACGGTCA TGCAAAAGGT
ATTCCAGGCT GGGGTAACGG GGAACTCGAG TACTATACAG ACGAAAACGC GTTCGTTGAG
AACGGCTGTC TTGTGATTGA GGCGAGAAAA GAACAGGTTT CCGATGAGTA CGGAACCTAC
GACTACACCT CAGCCAGGAT GACCACAGAA GGAAAATTCG AAATAAAGTA CGGAAAAATC
GAAATAAGGG CAAAACTTCC AAAAGGAAAA GGTATCTGGC CCGCTCTCTG GATGCTCGGA
AACAACATAG GAGAGGTCGG ATGGCCCACC TGTGGTGAGA TAGACATCAT GGAAATGCTT
GGCCACGACA CCAGAACCGT TTATGGAACA GCACACGGTC CGGGATATTC CGGTGGTGCA
AGTATAGGCG TGGCCTATCA TCTTCCAGAA GGAGTTCCTG ATTTCTCCGA AGACTTCCAC
ATTTTCTCCA TCGAGTGGGA CGAAGACGAA GTGGAGTGGT ACGTGGACGG ACAGCTCTAC
CACGTCCTCA GCAAGGATGA ACTGGCCGAA CTCGGTCTTG AGTGGGTTTT CGACCATCCG
TTCTTCCTCA TTCTGAACGT TGCCGTGGGA GGCTACTGGC CAGGTTATCC CGACGAAACC
ACCCAATTCC CGCAGAGAAT GTACATCGAC TACATCAGAG TCTACGAAGA TAAGAATCCT
GAAACAATCA CCGGGGAAGT GGATGACTGC GAATATGAAC AAGCACAGCA GCAGGCAGGT
CCCGAGGTGA CCTATGAACG GATAAACAAC GGCACCTTCG ACGAACCTAT TGTGAACGAT
CAGGCCAACA ACCCGGACGA ATGGTTCATT TGGCAGGCGG GAGACTACGG AATCAGTGGT
GCCAGGGTCT CCGATTACGG TGTCAGGGAT GGCTACGCTT ATATCACGAT AGCCGATCCT
GGAACTGACA CGTGGCATAT TCAGTTCAAC CAGTGGATAG GTCTTTACAG AGGAAAAACC
TACACCATTT CTTTCAAAGC AAAAGCGGAT ACACCAAGAC CTATAAATGT GAAAATTCTG
CAGAATCACG ATCCCTGGAC CAACTATTTT GCTCAAACGG TGAATCTCAC AGCGGACTGG
CAGACGTTCA CGTTCACCTA CACGCATCCA GACGATGCGG ATGAGGTCGT TCAGATCAGT
TTCGAACTTG GAAAAGAAAC GGCAACTACA ATCTATTTCG ATGATGTTTC GGTGAGTCCT
CAATGA
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| Protein sequence | MSRLVFALLL FPVFILAQNI LGNASFDEPI LIAGMDIDPP AEDGSINTEG NWVFFTNSNG
EGTARVENGV LVVEITNGGD HTWSVQIIQA PIRVEKLHKY RVSFRARASS QRNVGVKIGG
TAGRSWAAYN PGTDESGGMV FELGTDWQTY EFEFVMRQET DENARFEFQL GRYTGTVWID
DVVMEDIGVL EVSGEENEIY TEEDEDKVED WQLVWSQEFD DGVIDPNIWN FEIGNGHAKG
IPGWGNGELE YYTDENAFVE NGCLVIEARK EQVSDEYGTY DYTSARMTTE GKFEIKYGKI
EIRAKLPKGK GIWPALWMLG NNIGEVGWPT CGEIDIMEML GHDTRTVYGT AHGPGYSGGA
SIGVAYHLPE GVPDFSEDFH IFSIEWDEDE VEWYVDGQLY HVLSKDELAE LGLEWVFDHP
FFLILNVAVG GYWPGYPDET TQFPQRMYID YIRVYEDKNP ETITGEVDDC EYEQAQQQAG
PEVTYERINN GTFDEPIVND QANNPDEWFI WQAGDYGISG ARVSDYGVRD GYAYITIADP
GTDTWHIQFN QWIGLYRGKT YTISFKAKAD TPRPINVKIL QNHDPWTNYF AQTVNLTADW
QTFTFTYTHP DDADEVVQIS FELGKETATT IYFDDVSVSP Q
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