Gene Tpet_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0871 
Symbol 
ID5170599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp892104 
End bp893198 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content44% 
IMG OID640563390 
Producthypothetical protein 
Protein accessionYP_001244466 
Protein GI148270006 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTTCT TTCTGGTTGC GATCGTCCTT CTTGGTGTAT CAATGTTTGG CTTCAACATC 
ATTCTGGAAT CTACACCCAC ACTCTACGAT GTGGTGGAGT ACTACGCTGG GGACTGGTGT
ATATTCAGGA TGGTGTACGA TGGAACCGTT GATCCGTACA ATCCTCCTCT CCTTGAAACC
AACGCCACCG TCATTGGAAA AGTGATAAAA TGGCAAAAAC CAGAGGAAAA ACTCGCTGAA
ATACACAAAG AAGGTTCTTC TCTCAATCTC GTAGTGATAC ACGGAATGGA TCCGAGGGAA
TACACAGGCG AGATGACCGA GTACAAGAAA GAGATTGAGA AGGTGTTCGA GGAAATAGGA
GAAAGACTGA GAATAAACGT CTATCTGTTT ATCTACCCAA CTCTTCTTGC AGATCCGGAA
AAGTCAGCCG AAAGATTCAT CGATCTCACA AAAGATATGG AGAACATCAT CATATTCGCA
CACAGCATGG GAGGAATAAT AGCAGAGCAT ATCGCTGCTA AGCACCCTGG AAACGTGAAA
GGGATAATCT TCGCGGGAAC GCCTCACTTA GGAAGTCCAC TTGCCAACGT TCTGTTCACC
GATCCAGATC GATACGAAGA GGAGTTTCTC ATAGACAAAA AGACCGCAGA AAATCTCAGA
GCGGCTCTTC TGATATCCTA CGCGGGTTTC AGCGCAACGT ACGCTCCAGG ATACAGATAT
CTTCTCTGGC AAAGAAAACC ACTGGATTTT TCAAATGTTC CGTTTGTGAA CTTGGTCGGA
ACTATTTCCC TCGATAGTGT AGAAAGTATT CCAGGAATTC TGCTGAACAT CATGACAACA
TCTGCGTGGG ACACCCTGGG ATTAATTGGT TTGAAACTTC TTGTAAGCAG TGTTTCCACA
ATGAAAGACG ATTTTGAAGA AACGGATGGA ATGGTACCAT GCAAAAGTGC CTCATACGGA
GGAAATGTGC TCGTTTTCGA CGCCGATCAC GAAGATCTTT ACAAAAGAAG AGATATAATT
CTCGAAGGGC TTTCATATAT TCTTTTCAGA ATACTGGAAA ACGAGGTGAT TTTAAAGAAG
GGGGGATCGC AATGA
 
Protein sequence
MRFFLVAIVL LGVSMFGFNI ILESTPTLYD VVEYYAGDWC IFRMVYDGTV DPYNPPLLET 
NATVIGKVIK WQKPEEKLAE IHKEGSSLNL VVIHGMDPRE YTGEMTEYKK EIEKVFEEIG
ERLRINVYLF IYPTLLADPE KSAERFIDLT KDMENIIIFA HSMGGIIAEH IAAKHPGNVK
GIIFAGTPHL GSPLANVLFT DPDRYEEEFL IDKKTAENLR AALLISYAGF SATYAPGYRY
LLWQRKPLDF SNVPFVNLVG TISLDSVESI PGILLNIMTT SAWDTLGLIG LKLLVSSVST
MKDDFEETDG MVPCKSASYG GNVLVFDADH EDLYKRRDII LEGLSYILFR ILENEVILKK
GGSQ