| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0868 |
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| Symbol | |
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| ID | 5171784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 887463 |
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| End bp | 889436 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640563387 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001244463 |
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| Protein GI | 148270003 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAAGGT TGTTTGTCTT GTTGTCGCTT GTGCTCTTGG TTGTTTTTGC TCTTGCTGCC
AACGACACAT GGGTCTTTTA CGCAACACCG GAGGAGTACT ACAAGGTTAC AGGAAAAAAG
ATTACTGAGT ACCACGAATC ACCGATGCTT GCCAAACTCG TCAAAGAAGG AAAACTTCCA
CCCGTTGAGC AGAGGCTCCC GGAGGAACCG CTCGTGGTTC AGCCTGTTGA AAAAGTTGGA
CAGTTCGGTG GTACCTGGAG AAGGGTCTGG AAAGGGCCTT CTGACAGGTG GGGCATTTCC
AAGCTCATCG AAGTGAAACT CGCGTTCTGG GACAAAGAGG GTGGAGAGCT CGTTCCGGGG
CTCGCAAAGA GCTGGGAAGT TCTGGAAAAC GGAAGGATTT ATATCTTCCA TTTGAGAAAG
GGTGTGAAGT GGTCTGATGG AGCACCGTAC ACGGCCCACG ATATTGTGTT CTGGGTTAAC
GACATCGTAG GAAACGACGA TATCACACCT TCGAAACCCG ACTGGTACAA CATTGGCGTG
AAAGTCGAGG CGCTCGACGA CTACACGGTG AAGTTTGAAT TCAGCAAGCC TTACGGATTG
TTCCTTCTGA AAGTTCCATA CGGTGGATTT ACCGGAGCAC CAGCACACTA TCTGAAACAG
TTCCATCCAA AGTACACACC GATGGAAGAA ATAGAGAAGA AGATGGTAAA GGGCGTGCAC
AACACCTGGG TGGACCTCTT CAACGATAAA AACGACTTCC TTGAAAACAC CGAGCTTCCA
ACACTCTCAC CGTGGAAGCC TATCACCGAT CCAACGGAGC AGTTCTACAT ACTCGAGAGG
AACCCGTACT TCTGGGCGGT TGATATCGAA GGTAACCAGC TTCCGTACAT CGATTATGTG
CGGCACGAAT ACGTCAAGAA CGACGAAGTC ATACTCCTGA AGGCGATCTC CGGTGAAATC
GATATGCAAT GGAGACACAT CGGGGGACTG GGAGCGGGAG CAGGAAACTT CACACTGCTC
ATGGAGAACG CCCAGAGTGG AGGATACAGG GTGCTGAAAT GGATCGCTGC GAACGGTTCT
GCCAGCAGAA TCTCACTGAA CTACGCTCAC TCCGACGAGG TGATGAGGAA AGTCTTCAAC
GATGTGAGGT TCAGACAGGC TCTTTCACTT GCTATCAACA GGGAAGAAAT CAACGAGATC
CTCTTCAACG GTCTCGCTGA GCCGAGGCAG GCATCTCTCG TGAGTGGATC CCCGTACTTC
GATTCCGAAT GGGAAAAAGC GTACGCAGAG TACAATCCAG ACAGGGCGAA CAAACTTCTC
GATGAGATGG GATTGAAGTG GGATAACAAG CACGAGTACA GACTCTTACC GGATGGTAGA
CCGCTCCGAT TCACAATCAC CGTGACCGGA CAGTTCCATG TTGACGTCTG GACGATGGTA
AAAGAATACT GGAAGCAAAT AGGTGTCTGG GTAGAAATCG AGAACGTTGA AAGGTCTCTC
TTCTACGAAA GAGCCGATGC TGGTGACTTC GATGCGATGG TGTGGAACAT GGACAGGGCT
GCTCAACCAC TCTCTTCACC GATGGTTATC TTCCCGGGTT CCGAGGACAT AGCAGACTTC
TGGTACATAG GATGGAGTGA CTGGATCTCA TACTATATCG ACAAGAACAT AAGAGGCGTG
GAACCCGAAG AAGTACCCGA AGGATCTGAA CCACCAGAAG TAGTCTACAG ACTTGTCGAT
CTGTACTACC AGATAGCCTC CACGCCGAAT CCCGATAAAA TCAAAGAGCT CATGGCAGAA
GCGACGAAGA TCCATAGAGA AAATCTCTGG ATGATAGGAA CCGTCGGAGA GGACCTTTCG
CCTGCCATAG CGAAGAACAA CTTCAGAAAC GTACCGGAAT TCCTCGTAAC GGACGATGTG
TTGAGAACGC CTCTGAATGC CATGCCGATG CAGTTCTTCA TCGAACAGAA ATGA
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| Protein sequence | MRRLFVLLSL VLLVVFALAA NDTWVFYATP EEYYKVTGKK ITEYHESPML AKLVKEGKLP
PVEQRLPEEP LVVQPVEKVG QFGGTWRRVW KGPSDRWGIS KLIEVKLAFW DKEGGELVPG
LAKSWEVLEN GRIYIFHLRK GVKWSDGAPY TAHDIVFWVN DIVGNDDITP SKPDWYNIGV
KVEALDDYTV KFEFSKPYGL FLLKVPYGGF TGAPAHYLKQ FHPKYTPMEE IEKKMVKGVH
NTWVDLFNDK NDFLENTELP TLSPWKPITD PTEQFYILER NPYFWAVDIE GNQLPYIDYV
RHEYVKNDEV ILLKAISGEI DMQWRHIGGL GAGAGNFTLL MENAQSGGYR VLKWIAANGS
ASRISLNYAH SDEVMRKVFN DVRFRQALSL AINREEINEI LFNGLAEPRQ ASLVSGSPYF
DSEWEKAYAE YNPDRANKLL DEMGLKWDNK HEYRLLPDGR PLRFTITVTG QFHVDVWTMV
KEYWKQIGVW VEIENVERSL FYERADAGDF DAMVWNMDRA AQPLSSPMVI FPGSEDIADF
WYIGWSDWIS YYIDKNIRGV EPEEVPEGSE PPEVVYRLVD LYYQIASTPN PDKIKELMAE
ATKIHRENLW MIGTVGEDLS PAIAKNNFRN VPEFLVTDDV LRTPLNAMPM QFFIEQK
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