Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0864 |
Symbol | |
ID | 5171325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 883324 |
End bp | 884310 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640563383 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001244459 |
Protein GI | 148269999 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTCGCTT ATATAGCAAA ACGAGTTCTC TACGCCATTC CTTTGTTGTT CGTTATCTCT ATTGTCTCTT TCATCATCAT CGAACTTCCT CCAGGAGACT ATCTCACCAC ATATGTTATG ACGCTCAGGC AGAGTGGAGA GACCATCGAT CAGGCGGCTC TGGAAGTTCT GAAGAAAAGG TATGGTCTGG ACAAACCAGT GATAGTCCGA TACTTTTACT GGATCGGCAA CATCATTACG AAAGGTGACT TCGGATACTC TTTCATGTGG GAAAAACCTG TCAGTGATTT GTTGAATCAG AGGGTCTGGT GGACAATACT GATATCCGTT CTTTCAACGG CTTTCGCGTG GGTTTTCGGA TTTTTAATAG GTGTTTATTC TGGAACGCAT CAGTATTCTA TCGGTGATTA TGTTTTTACC GTGCTTGGTT ATATAGGACT CGCTACACCT AACTTCCTCC TCGCTCTGAT TCTTTTGTGG TTCATGTTTG TAACGACCGG TGTTAGTTTA GGTGGACTAT TTTCTCCGGA ATATGCCGGT GCTCCCTGGT CGTGGGCCAA ATTTGTTGAT CTCTTGAAGC ACATCTGGAT TCCAGTAGTT GTCCTGGGAA CGGGAAGCAT GGCCGGTCTC ATAAGGGTTT TGAGAGCGAA TCTCCTCGAT GAAATAAACA AGCCTTATGT GGTTGCAGCG AGAGCAAGAG GAGTACCTGA GAGAGAACTC GTCTGGAAGT ACCCGTTGAG AGTTGCCGTC ATTCCTTTTG CTTCCACTGC TGGGTGGGCA CTTCCTCAGA TAGTCTCAGG TGCAGTTGTG ACGGGTATCG TTTTGAACCT TCCCACGGTT GGTACGCTTC TTCTTGACGC ACTCACTTCC CAGGATATGT ACCTTGCAGG GAGTCTCGTT TTGATACTGA GTGTCTTCAC GATCATAGGA ACTCTCATAT CCGACATCTT ACTTGCCTGG CTCGATCCCA GAATAAGATT CGAATGA
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Protein sequence | MLAYIAKRVL YAIPLLFVIS IVSFIIIELP PGDYLTTYVM TLRQSGETID QAALEVLKKR YGLDKPVIVR YFYWIGNIIT KGDFGYSFMW EKPVSDLLNQ RVWWTILISV LSTAFAWVFG FLIGVYSGTH QYSIGDYVFT VLGYIGLATP NFLLALILLW FMFVTTGVSL GGLFSPEYAG APWSWAKFVD LLKHIWIPVV VLGTGSMAGL IRVLRANLLD EINKPYVVAA RARGVPEREL VWKYPLRVAV IPFASTAGWA LPQIVSGAVV TGIVLNLPTV GTLLLDALTS QDMYLAGSLV LILSVFTIIG TLISDILLAW LDPRIRFE
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