Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0793 |
Symbol | |
ID | 5170990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 804259 |
End bp | 805035 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640563312 |
Product | flagellin domain-containing protein |
Protein accession | YP_001244388 |
Protein GI | 148269928 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGGTGA ACGATGTAAG TCTGATGCGG TACATTCAGC AACTCAGCCT TGAAAGAAAA GCCCCCACAC CGGGAAGTTT TCTCTTCAAC ACAGTATCCG AACTTACCAT TCAGCAGAAA TTGAGAGGAC AGATAGAAGG ATACAAAACG ACACTTTCAC AAATATACAA CGGAATAGGT CTTCTGAACA CGGCCGATTC GGGACTTGAA AGCATATCAA CATCGCTTCA GAGGGCAAGA GAACTCGCCG TTCAGGCTTC GAACGCTACT CTCACAGACG TAGAAAGATC CATGACACAG AAAGAATACG AAGAAATAAT GCGCGGTGTG AAAAGGATTA TCCAGCAGAC AACTTACAAC GAACAGAGGG TGCTCGCTGG AGACGTTCGA AACCTTGTGA TCCAGACGGG ACCCAATGAA GGACAGAACG TAACGGTGAA CATACCAAAC CTCGAAGAGA CTCTCTCCGA ACTGTTTGAA GTGGACCTTT CCACCTTCGA AGGAGCACAA AGATCTCTTG AAACCATAGA TCAAGCTCTG GAAAACATCT CTCAGATCAG AGGAAACGTT GGATCCTGGA TGAACAGGCT GGAGTCTTCA GCGAGAAGTG TGATGAACAG CTACACGGAG CTCTTCAAAA CAGAAAGCCT TTTCGAACCG AACGTGGCAG AACTTCTCCT CGAGTCAACG AAGGAAGACA TTTTGAGACA GACGGCACTG ACCGGAATTC TCTTCAGAAT GGAAAATGCG GGAAACGTAC TCAAACTCTT GATGTAG
|
Protein sequence | MRVNDVSLMR YIQQLSLERK APTPGSFLFN TVSELTIQQK LRGQIEGYKT TLSQIYNGIG LLNTADSGLE SISTSLQRAR ELAVQASNAT LTDVERSMTQ KEYEEIMRGV KRIIQQTTYN EQRVLAGDVR NLVIQTGPNE GQNVTVNIPN LEETLSELFE VDLSTFEGAQ RSLETIDQAL ENISQIRGNV GSWMNRLESS ARSVMNSYTE LFKTESLFEP NVAELLLEST KEDILRQTAL TGILFRMENA GNVLKLLM
|
| |