Gene Tpet_0790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0790 
Symbol 
ID5170652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp802349 
End bp802921 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content49% 
IMG OID640563309 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001244385 
Protein GI148269925 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCA GCAGATACAC AACTTCGCCG CCGTTCGATG TGAACACCTA CGTGTTTGAG 
ATTGATGGTA CTCTCTACGT GATAGATCCA GGAGAAGGGA TCTCTCAATT CGTCAGCAAG
CCAGTCGTTG TCCTCGTCAC ACACGGCCAC TGTGACCACA TATCGGGAAT CCTGGAACTG
GATGTGAGAG GTCTTTTCAT CTCTCCCGAA GACGCCTTCA CGCTGACAGA TCCTGCCGCG
AACCTTTCCA GTGATTTCAT GGACCATTCG GTGATCGTCG ATCTTCCATG GGAGAACATC
GATCTTCATT TCAGAACCCT TAAGGTGCCA GGTCACACAA AAGGGTCTCG ATTCATCATC
TTCGACGGAG TGGTTTTCAC CGGAGATACG GTCTTTGCCG ACACGATCGG AAGAATAGAC
CTTGGAGGAT CGGAAGAGAA AATGAAAACC ACGCTGAAAA AGGTGAAAGA GTTCTTCAAA
AATCTTCCAG AGGACTGGCT CGTGTGTCCG GGCCACGGCG AGATCACAAC TGTGGGAGAT
CTTCTGAAAA GGAACATATT CCTGGGGAGG TAA
 
Protein sequence
MKVSRYTTSP PFDVNTYVFE IDGTLYVIDP GEGISQFVSK PVVVLVTHGH CDHISGILEL 
DVRGLFISPE DAFTLTDPAA NLSSDFMDHS VIVDLPWENI DLHFRTLKVP GHTKGSRFII
FDGVVFTGDT VFADTIGRID LGGSEEKMKT TLKKVKEFFK NLPEDWLVCP GHGEITTVGD
LLKRNIFLGR