| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0782 |
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| Symbol | |
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| ID | 5169942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 793768 |
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| End bp | 795120 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640563301 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001244377 |
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| Protein GI | 148269917 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000969424 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAAG TTCTCATCGT TGACGACAGC AAATTCTGGC GGCTTGTCGT TTCTGATATC
GTAAAAAACA TCAAGAAAGA CGTAGAGATC CTCCTCGCAG AGGGTGGAAT GGACGGGTTA
CAGAAGGCTT TGAATCACAG ACCCGACTAC TTCATCATCG ATTACAACAT GCCTGATTTT
TCTGGGCTGT ATCTTTCTGT TGTTTTGAGA GAAATGAAAG CTTTCAAAGA CTCAGGAATA
GTCATATTAA CGGCATCCTC TGACACGATC AATCCCTTCT GGGCGAAAAA GAGTGGAGCG
AATCTGTTCA TAAACAAAGG AAAAAAAGAG GAAATCGAGA AGGAACTTCA GGTTTTTCTG
AACACTCCAT ACGAGTCTCT CAAAAACTAT GAGAGCAGCG AATCTGGAAA CGTTTTTCAT
ATCGTTGAAA AGCGATTGAA AAGGGAGATT CTTGAGAAAG AAATTCTCTC TTATCTCAAG
TACTCCCGTG ACGAGAGATA CGTGATTTCC CTTCTTGTTA TGCTGTTCAG AAATTTCTCT
CTGTTTGGAA GCTTCAGAGC GCTTCTTATT TCCACGAGTG AAGGAAGGAT TTACTCCTTT
GGAAAGCCGG TTGATAAAGA AGTTCTCAGA AAGTTTTTGA TCTCCAAACT GGAAAAACCG
ACATCTCCAT CTTTCTGGTC CTTTCATGGT GTTTTCGGTG AGGGCTCGAT TTCGGATGAT
AACATTTCTG CAGTCGTGAA AGATGACGGA ACAGAACTCG GGGTTGTCCT ATTCGAAGAT
GTTGAAAATC CATTCCTCTT GAGAAATGCT TTAGAAGATT CTCTTTCGAG TCTCATGGTT
CTTTTCAGAA ATCTGAACGA CTTTCGAGAT TACGTGATCG CTTCAGAAAC AGACGGACTG
ACGGGTTTGT TCAACAAGAG GGCCATCATG AGATTTCTGG AGGAGGTTCT TCGAAGCGGA
AAGAATATCG CAGTGGCTAT GATGGATATA GACGATTTCA AGAAGATAAA CGACACGTTC
GGCCATCCTG TGGGAGATGA AGTGTTGAGG GCGGTGGCAA ACATACTGAG GGAAACTGTG
AAAAGCGGAA AAGTGGGAAG ATACGGTGGA GAGGAGTTCA TGGTGGTGTT TGAAACAGGT
GAACGAGACG CGGTGGTAAA AACGATGAAT AGCATCATGG AGAACATCAG AAACTTCGAC
TGGCAGAAGA TATTCGGAAG TGAAAAGAAA GTAACTTTGA GTGGAGGAGT TGCGTTTTCA
AAGAAAGAGT CCTCACCGGT GGAATTGATA GAGGAAGCAG ACAAAAAACT TTACACAGCT
AAGCGTTCTG GGAAAGATCG TTACGTGATA TAA
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| Protein sequence | MKKVLIVDDS KFWRLVVSDI VKNIKKDVEI LLAEGGMDGL QKALNHRPDY FIIDYNMPDF
SGLYLSVVLR EMKAFKDSGI VILTASSDTI NPFWAKKSGA NLFINKGKKE EIEKELQVFL
NTPYESLKNY ESSESGNVFH IVEKRLKREI LEKEILSYLK YSRDERYVIS LLVMLFRNFS
LFGSFRALLI STSEGRIYSF GKPVDKEVLR KFLISKLEKP TSPSFWSFHG VFGEGSISDD
NISAVVKDDG TELGVVLFED VENPFLLRNA LEDSLSSLMV LFRNLNDFRD YVIASETDGL
TGLFNKRAIM RFLEEVLRSG KNIAVAMMDI DDFKKINDTF GHPVGDEVLR AVANILRETV
KSGKVGRYGG EEFMVVFETG ERDAVVKTMN SIMENIRNFD WQKIFGSEKK VTLSGGVAFS
KKESSPVELI EEADKKLYTA KRSGKDRYVI
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