Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0730 |
Symbol | |
ID | 5171739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 735551 |
End bp | 736171 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640563239 |
Product | ABC transporter related |
Protein accession | YP_001244326 |
Protein GI | 148269866 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000333967 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTGTTT TAAAGAATGT GAAATACAAG GACATATTAA ACATTGAAGA ACTCCACATT CCGCCACGAA AAATTACCGT TATTACAGGA AAGAGCGGCA CAGGAAAAAC AACTCTTCTG AAGATGCTGA ACAAACTTAT TTCACCGGAT AGTGGAGAGA TTTTCTTCAA AGGCACACCA TTGAAAGAGA TCGATTCGGT TGAACTCAGA CGGAAAGTGG TGATGCTTCC TCAGTTTCCT GTTGTGTTTC CCGGAAACGT GAAGGAAAAT CTTATCTTAG GCTTGAAATT TTCTGGAAAA AAGATACCAC ACGATGAAGA GTTGAGAAAC ATCTTAAAGT TCGTTATGCT CGAAAAAGAC CTGAACGATG ATCCAGAAAA ATTCTCCGGA GGCGAAAAAC AGCGACTCGC TCTGGCAAGG GTTCTTCTCA TGGATCCTGA GGTGCTGCTC CTCGATGAAC CCACTTCCTC TCTGGACGAA AAAACCGGCA TTGAAATCAT CAAAAAAGTG TCTAACTTTG CAAAAAATCG GGAGAAAACG CTTGTCATAG TGACTCATAA CCCGGAATTG AAAAAATTCG CAGATGTGTT GATCGAACTC AAAAACGGGA GGGTTTTGTG A
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Protein sequence | MFVLKNVKYK DILNIEELHI PPRKITVITG KSGTGKTTLL KMLNKLISPD SGEIFFKGTP LKEIDSVELR RKVVMLPQFP VVFPGNVKEN LILGLKFSGK KIPHDEELRN ILKFVMLEKD LNDDPEKFSG GEKQRLALAR VLLMDPEVLL LDEPTSSLDE KTGIEIIKKV SNFAKNREKT LVIVTHNPEL KKFADVLIEL KNGRVL
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