Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0666 |
Symbol | |
ID | 5171250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 674694 |
End bp | 676595 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640563173 |
Product | DNA topoisomerase I |
Protein accession | YP_001244262 |
Protein GI | 148269802 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000220674 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGGA AAGTGAAGAA ATACATCGTC GTTGAGTCTC CTGCCAAGGC GAAGACGATC AAGAGTATTC TTGGAAACGA ATACGAAGTC TTCGCTTCGA TGGGTCATAT CATAGATCTT CCCAAAAGTA AATTTGGGAT AGATCTGGAA AAGGATTTCG AACCGGAATT CGTGGTAATA AAAGGGAAAG AAAAAGTGGT CGAAAAGCTG AAAGATCTTG CAAAAAAGGG AGAACTGCTC ATCGCTTCTG ATATGGATAG GGAAGGAGAA GCTATAGCCT GGCACATAGC CAGAGTGACG AACACTCTTG GGAAGAAGAA CAGAATTGTG TTCTCTGAGA TCACTCCTCG CGTGATAAGA GAAGCCGTTA AAAATCCTCG AGAAATTGAC ATGAAGAAAG TTCGAGCACA GCTTGCAAGG AGAATTCTGG ATAGGATCGT TGGTTATTCT CTGAGTCCGG TACTCTGGAG AAATTTTAAA ACCAACCTGA GCGCTGGCAG GGTCCAATCG GCTACACTGA AGCTCGTTTG TGATAGAGAG AGAGAAATCC TCAGGTTTGT ACCAAAGAAG TACCACAAGA TCACCGTCAA ATTCGATGGT CTCACGGCAG AAATAGATGT GAAAGAAAAG AAGTTTTTCG ACTCTGAAAC GTTGAAAGAG ATCAAGAGTA TAGACGAACT CGTCGTAGAG GAGAAAGAGG TTTCTTTGAA AAACTTTTCA CCTCCAGAAC CCTTCAAAAC CAGTACCCTC CAGCAGGAGG CGTATTCCAA ACTGGGTTTC TCCGTTTCCA AAACCATGAT GATCGCCCAG CAGTTGTATG AAGGTGTAGA AACGAAAGAT GGGCATATCG CGTTCATAAC CTATATGAGA ACAGATTCAA CGCGTGTATC GGATTACGCG AAAGATGAAG CCAGGAATCT GATAACAGAA GTCTTTGGAG AGGATTATGT TGGTGCGAAA GGAGCAAAGA GAAAAGGCAA CACAAAAATA CAGGATGCGC ACGAAGCGAT TCGTCCCACG AACGTTTTCA TGACACCCGA GGAAGCGGGG AAATACCTGA ATCCTGACCA GAAAAAACTC TACGAGTTGA TATGGAAGAG ATTTCTCGCT TCTCAGATGA AGCCTTCTCA ATACGAAGAA ACTCGCTTTG TCCTGAGAAC AAAAGACGGA AAGTACAGAT TCAAAGGAAC GGTGTTGAAA AAGATTTTCG ATGGATACGA AAAGGTGTGG ACGACGGAAA GAAACACAGG GGAGTTTCCT TTCGAAGAAG GAGAATCTGT GAAACCGGTG GTTGTAGAAA TAGAAGAACA GGAAACCAAA CCAAAACCAA GGTACACTGA AGGTTCACTC GTGAAGGAAA TGGAAAGGCT TGGTATAGGT CGTCCCAGCA CCTACGCATC CACGATAAAG CTCCTGTTGA ATAGGGGTTA CATAAAGAAG ATCAGAGGTT ATCTCTATCC TACTGTCGTT GGAAGTGTTG TCATGGATTA TCTGGAGAAA AAGTACTCCG ACGTTGTTAG CGTTTCTTTC ACGGCTGAGA TGGAGAAGGA TCTCGATGAA GTCGAACAGG GCAAGAAGAC AGACAAGATC GTCTTGCAAG AGTTTTATCA ATCCTTTTCC AGTGTGTTCG ATAGGAACGA CAGGATTGTG ATCGATTTTC CAACGAACCA GAAATGTTCG TGTGGAAAAG AAATGAGACT CTCTTTTGGG AAATACGGCT TCTATTTGAA ATGTGAGTGT GGTAGCACCA GAAGCGTGAG AAACGATGAA ATTGCAGTCA TAGACGATGG AAAAATATTC CTGGGGAGGA AAGACAGTGA GAGTGGCTCT CCTGATGGGA GGAGTATCAA GGGAAAGAGA AATCTCCCTG AGAAGCGGAG AAAGGGTAAA AAAAGCTCTT GA
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Protein sequence | MNRKVKKYIV VESPAKAKTI KSILGNEYEV FASMGHIIDL PKSKFGIDLE KDFEPEFVVI KGKEKVVEKL KDLAKKGELL IASDMDREGE AIAWHIARVT NTLGKKNRIV FSEITPRVIR EAVKNPREID MKKVRAQLAR RILDRIVGYS LSPVLWRNFK TNLSAGRVQS ATLKLVCDRE REILRFVPKK YHKITVKFDG LTAEIDVKEK KFFDSETLKE IKSIDELVVE EKEVSLKNFS PPEPFKTSTL QQEAYSKLGF SVSKTMMIAQ QLYEGVETKD GHIAFITYMR TDSTRVSDYA KDEARNLITE VFGEDYVGAK GAKRKGNTKI QDAHEAIRPT NVFMTPEEAG KYLNPDQKKL YELIWKRFLA SQMKPSQYEE TRFVLRTKDG KYRFKGTVLK KIFDGYEKVW TTERNTGEFP FEEGESVKPV VVEIEEQETK PKPRYTEGSL VKEMERLGIG RPSTYASTIK LLLNRGYIKK IRGYLYPTVV GSVVMDYLEK KYSDVVSVSF TAEMEKDLDE VEQGKKTDKI VLQEFYQSFS SVFDRNDRIV IDFPTNQKCS CGKEMRLSFG KYGFYLKCEC GSTRSVRNDE IAVIDDGKIF LGRKDSESGS PDGRSIKGKR NLPEKRRKGK KSS
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