| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0565 |
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| Symbol | |
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| ID | 5170629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 562964 |
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| End bp | 563950 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640563072 |
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| Product | Outer membrane protein-like protein |
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| Protein accession | YP_001244162 |
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| Protein GI | 148269702 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATC TCTTCGTGGT GCTGTTGTCT CTCGTTTCTG TGCTGAGCTT TTCTGTTTCT
CTGAATGATG TTCTTCAAAC CGCTCTTGCA AGCAGTACAG ATTATCAAAT CGCGCAGATC
AACTTAGAAT CCGCGACGAT GGACTACGAA AAAGCAAAAC TCGAAGCAAC GAACAAGAGA
TCAGAACTCT CCGCAGAACT CAGCTACTAC AACAACCTTC AAAGCTACAG AAACTCGCTG
AAATCCGCTT ATCAAGATGT TCTGGGAAGG ATTTTCAATC TCCTGACCGC TGACCTTTCC
TACGAAATCG CACAGCTGAA CTTCGAAAAC GCCCAGGAAG ACTACAAAAC CAGTCAGGAG
CTTTTCAAGA AGAATCTCAT TTCCGAGAAC GACCTGAAAG ATTCAGAGCT CACCCTCGAA
GAAGCCAGCA ACAACCTCCT TTCCGCCCAA AAAGACCTTG AAGAAGCCCA AAAAGATTAT
GAGGAGATCT TCAGCGTGGA AGTGAGTGAA ATAGAGCTTC CTCTCATCGA TTATCAGAAC
CTTGTGAGTG AAGACGAATA CCTCGACAAT CTTTCTTCCG TCAAGATCGC GGAGCTGAAC
ATGAAGATCG CTGAATACGA TCTCAACAAC CTCTCCGCTT CCGCTTCGAA GTACGAACAG
AAAAAGGCAG AGCTGAATTA CAAGAAATCA AAGATGAACT ACGACGAAGC TTTGAAAGAA
GCAAAAGACA GCTATAAGAG CACCCTCGAT TCTCTGGAAA TCGCCTTCTT GAATTTGAAA
GTACTGAAAG AAAAGGTTGA CCTCAACGAG AACATCCTCA AAGATTACCA GGAAAGATAC
GAAAAGGGAC TGATCTCAAA GAAAGAACTG AACACCCAGA AGATCAATCT TCTCAACACC
AAAAAGAACT ACTTCAATTC GCTACGCAGC TACTACACTT CGATCGTGAA CTTCCTGATA
GACGCTGGAA AAGAAGTCTC CTTTTGA
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| Protein sequence | MKNLFVVLLS LVSVLSFSVS LNDVLQTALA SSTDYQIAQI NLESATMDYE KAKLEATNKR
SELSAELSYY NNLQSYRNSL KSAYQDVLGR IFNLLTADLS YEIAQLNFEN AQEDYKTSQE
LFKKNLISEN DLKDSELTLE EASNNLLSAQ KDLEEAQKDY EEIFSVEVSE IELPLIDYQN
LVSEDEYLDN LSSVKIAELN MKIAEYDLNN LSASASKYEQ KKAELNYKKS KMNYDEALKE
AKDSYKSTLD SLEIAFLNLK VLKEKVDLNE NILKDYQERY EKGLISKKEL NTQKINLLNT
KKNYFNSLRS YYTSIVNFLI DAGKEVSF
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