| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0502 |
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| Symbol | |
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| ID | 5170489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 497716 |
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| End bp | 498600 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640563009 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001244100 |
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| Protein GI | 148269640 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000387923 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAGAC TGAAGCCGTT ACTTTTGCTT TTTCCTCTTC TTGCCTTCGT GATCATTTTC
TTTGTGATCC CTGTTGTTCT CACCGTAGTG ATCGCGTTCA CAGACATGGA CTATTCGTTC
GTATGGAATT TCGTGGGGTT TCAGAATTTC AGGGATATTT CCACGGATTT CATTATTCCA
CGTGTGATAG CGAACACCTT CATATACACT TTCGGTACGT TGGGACTTTT CAACCTTGGA
ACGGCCCTTC TTATTTCACT TCTCACAACG TCGATCAGCG ATAGATGGGG TAACTTCTTC
AGGACTCTCT GGATGCTTCC AAGACTCACG CCGTCTGTTG TTTATGGACT CCTCTGGCTC
TGGATGTTCG ATCCCACAGA GTACGGACTT GTGAACTTCA TACGGGGACT CTTCGGCCTT
CCTCCACAGG ACTGGCTTCA CAGTGCTCCT ATGTGGATGG TGATCTTCGC AAACGGTTTC
ATAGGTGCTT CGATGGGAAT GCTTGTCTTC ACAGCGGCGA TAAAATCCAT ACCAGAAGAT
TACTACAGGG CAGCCCGTAT CGATGGAGCG AGTTGGTTTA TGGTGGTGAG GAGAATCACC
CTTCCTCTGA TAAAGTGGCA TCTTCTCTTC GTGACTGCAT ACCAGACACT TTCCCTTCTT
GCCTCTTTTG AATACATACT CATCATCACG GACGGTGGAC CCGTTTACAG AACAGAGGTG
TGGGCACTCT ACACGTACCA CAACGCCTTT TCACACTTCA GATTCGGCTA CGGTGCAGCC
CTTTCGATCA TCCTCGTTAT CATAGGTGTG GTTTCTGCTC TTGTCTACAT GAAGTTCTTC
GGTTTTGAAT CTCTCATGGA AAAACCGAAG GTCGAGGTGG AATGA
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| Protein sequence | MKRLKPLLLL FPLLAFVIIF FVIPVVLTVV IAFTDMDYSF VWNFVGFQNF RDISTDFIIP
RVIANTFIYT FGTLGLFNLG TALLISLLTT SISDRWGNFF RTLWMLPRLT PSVVYGLLWL
WMFDPTEYGL VNFIRGLFGL PPQDWLHSAP MWMVIFANGF IGASMGMLVF TAAIKSIPED
YYRAARIDGA SWFMVVRRIT LPLIKWHLLF VTAYQTLSLL ASFEYILIIT DGGPVYRTEV
WALYTYHNAF SHFRFGYGAA LSIILVIIGV VSALVYMKFF GFESLMEKPK VEVE
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