Gene Tpet_0409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0409 
Symbol 
ID5170692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp395315 
End bp396820 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content49% 
IMG OID640562908 
ProductMg chelatase, subunit ChlI 
Protein accessionYP_001244009 
Protein GI148269549 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID[TIGR00368] Mg chelatase-related protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00467641 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACTACA GCAAACTCTC CTCCGCCACG ATACAGGGAA TAGAAGCAAT GAAAATAGAT 
GTGGAAGTGG ATTTCGACAA CAGGAGCGTT TTCAACGATA TAGACGTGGT CGGTCTCGGT
GACACCGCTG TGAAAGAGAG CAGAAAAAGG GTGAAAAGTG CTATTCTGAA CAGCGGATTT
TCTCTTCCAC ACGGTAAATA CGTGGTGAAC CTCGCTCCTG GAGACGTGAG AAAAGAAGGT
TCCATGCTCG ACCTGCCAAT CGCACTGTGC ATACTCGCTT CAACAGGAAT AGTTCAGGTG
AGCGAAAACA TCCTCGCTAT AGGAGAACTC TCGCTGAATG GAGAAGTGAA GAGGGTGAAC
GGGGTTCTTC CCGTTCTTCT TTCACTTTCA GAAAAGTTCA GTGGCACGGT GCTCATCCCA
AAAGAAAACG AAGAGGAAGC AAAGTGTGTG AAAGGACTGG ATATATACGC AGTGGAATCT
CTCAGAGAAT GCGTTGAGTT TTTGAGGGGA GATAGAGCGC TGAAACAGAT CGAGTATTCG
GGTATAGGAA ACACGAACGT TGAATACGAG ATTGATTTTT CCGACGTTAG AGACCACGAG
ATGGTGAAAA GAGCGGTGGA GATAGCCGTC GCAGGTTTTC ACAACATCCT CATGATAGGA
AATCCCGGTT CCGGAAAGAC CATGATAGCG AAGAGAATTC CCACGATCTT TCCTCCCATG
TCCGAAGAGG AAATCCTCGA GACGAGTAAG GTGTACAGCG CATCTGGTTA TCCCGGGATC
GTGAAACTCC GTCCCTTCAG ATCTCCCCAT CACACAGCGT CGACCGTCTC CATCATCGGT
GGCGGTACCA ACCCAAGACC CGGTGAGATT TCTCTTGCAC ACAACGGTGT TCTGTTCCTC
GATGAACTGC CGGAGTTCAA AAGGGATGTG TTGGAAGCCT TGAGACAGCC TCTTGAGGAA
GGTATCGTCA CGGTTGCCAG AGCGAAGTTC ACCGTCACAT ATCCCGCTCG CTTCATGCTG
GTCGGTGCCA TGAATCCCTG TCCCTGTGGG CATCTTGGAG ATCCGAAACA ACCTTGCGTC
TGTTCTCCCA GAGACATCAT GAGGTACAGA AAGAAAATCT CAGGTCCTCT TCTGGACAGG
ATGGATCTGG TGATCAACGT TCCGAAGCTC TCCTTCGAGG AAATGATGAA AAAACCCGAA
GGAGAGAAAA GCTCTTCAAT CAGAGAGCGG GTGATTAAGG CGAGGGAGAT ACAGAAAAGA
CGTTTCAGGG ATACTCATAT TTCCTGCAAT TCACAGATGT CTCACAGAAT GCTGAGGAGG
TTTGTCCAGC TGGACGAGAA GAGTGAGGAC CTCTTGAAAA GATACGTGGA GAAATATGGA
CTGTCAGGTA GGAAGATCGA CAAAGTTCTG AAACTTTCAC GAACGATAGC GGATCTGGAA
GGTTCAAGCG GTGTAGAAAT GAGACACCTC GCGGAAGCAC TCCAGTACAG GTTTAGGGAG
AGTTAA
 
Protein sequence
MNYSKLSSAT IQGIEAMKID VEVDFDNRSV FNDIDVVGLG DTAVKESRKR VKSAILNSGF 
SLPHGKYVVN LAPGDVRKEG SMLDLPIALC ILASTGIVQV SENILAIGEL SLNGEVKRVN
GVLPVLLSLS EKFSGTVLIP KENEEEAKCV KGLDIYAVES LRECVEFLRG DRALKQIEYS
GIGNTNVEYE IDFSDVRDHE MVKRAVEIAV AGFHNILMIG NPGSGKTMIA KRIPTIFPPM
SEEEILETSK VYSASGYPGI VKLRPFRSPH HTASTVSIIG GGTNPRPGEI SLAHNGVLFL
DELPEFKRDV LEALRQPLEE GIVTVARAKF TVTYPARFML VGAMNPCPCG HLGDPKQPCV
CSPRDIMRYR KKISGPLLDR MDLVINVPKL SFEEMMKKPE GEKSSSIRER VIKAREIQKR
RFRDTHISCN SQMSHRMLRR FVQLDEKSED LLKRYVEKYG LSGRKIDKVL KLSRTIADLE
GSSGVEMRHL AEALQYRFRE S