Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0381 |
Symbol | |
ID | 5169981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 368746 |
End bp | 369564 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640562882 |
Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit |
Protein accession | YP_001243983 |
Protein GI | 148269523 |
COG category | [C] Energy production and conversion |
COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATAAACA AACATGTTAT TTCCGAAAAG ATCAAGAAGG CTATCATTGA TGCCAACATA AAGATCAATC CAGAGGTAGA AGAAATCATC GAGCGGTACG AAGGTCCCTT TTCAGATATA ATAAAGGAAA ACTACCGCGT TTCCAAAGAG GAAAAACTTC CACTCTGTCA GGACACAGGG ATAGTGGAAT TCTTCGTCTT CATCGGTCAC GAGGTAAAAC TGGAAGAACC CATTGAGGAA ACTCTGAACA GAGCCGTTGG AGAGGTGTAC AGCGAGTATC CTTTTCGTTA TTCGATCGTC ACCGATCCAC TCTTTGAAAG AATCAACACT GGAACGAACA CTCCCGCAAT CGTCCACATC TTCCAGGTGA AGGGAAAATC CCTTGAGATC AGATTTCTGG TGAAAGGTGG AGGCAGTGAA AATCTCACGG TTCTTCGTAT GATGACTCCC ACCTCGGATG TGGAGAAAGT CAAAGAATTC GTTATCGAGC ACATCAAAGA ACACGGAGCA AAGGCCTGCC CGCCGCTTCA CGTGGGTATC GGAATCGGAG GAACAGCCGA TAAGGCCCTT CTCCTCTCGA AGTTAGCGCT TACGAAGAGC TTCAAAGAGA GAAACAAAGA TCCAAAGTAC GCAGGGCTCG AAAAGGAACT TGAAAAGGAA CTCAACTTTC TCGGAATAGG CTTTCAAGGT CTCGGAAAGG GTATCACTGT TTACTCTGTT CACATAGAAC ATTTTCCGAC CCATATCGCC ACCCTGCCGG TTGCCGTCTC GGTGGATTGC TACCTCTGCA GAAGGGGGAA AGTGACTTTT GAGGATTGA
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Protein sequence | MINKHVISEK IKKAIIDANI KINPEVEEII ERYEGPFSDI IKENYRVSKE EKLPLCQDTG IVEFFVFIGH EVKLEEPIEE TLNRAVGEVY SEYPFRYSIV TDPLFERINT GTNTPAIVHI FQVKGKSLEI RFLVKGGGSE NLTVLRMMTP TSDVEKVKEF VIEHIKEHGA KACPPLHVGI GIGGTADKAL LLSKLALTKS FKERNKDPKY AGLEKELEKE LNFLGIGFQG LGKGITVYSV HIEHFPTHIA TLPVAVSVDC YLCRRGKVTF ED
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