| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0367 |
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| Symbol | |
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| ID | 5170788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 352811 |
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| End bp | 354352 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640562870 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001243971 |
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| Protein GI | 148269511 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGAGAA TTAAGATCTT CGATACAACG TTGAGGGATG GAGAGCAATC CCCAGGGGCT
TCGATGTCGG TTGAGGAAAA AGTAGAAATG GCACTCATGT TAGAGGATCT CGGTGTCGAT
CTCATCGAGG CTGGGTTTCC CGTTTCATCT CCCGTGCAGT TTGAAGCTGT AAAAAGAGTT
GCGAGCGCCG TTCAGAAACC CATAGTGGTG GGACTCGCAA GGTGTGTTGA AAAGGACATA
GACGCGGTGT ACGAGGCTCT CAAGGATCGA CCAAAAGACA AACGTATGAT ACACGTTTTC
ATAGCGACCT CTCCGATTCA CAGAAAATAC AAACTGAGAA TGGAGAAAGA GGAAATCCTC
GAGAGGATCA GAAGATACGT CGGCTACGCA AAACAGTTTT TCGACCTTGT GGAGTTCTCG
GCGGAAGACG CTTCGAGAAC GGAGGTTCCC TTTTTGATAG AAGCCTACAA GACGGCGATC
GAAGCCGGAG CCACAACGAT CAATGTTCCG GACACGGTGG GGTACGCCCT TCCCGATGAG
TTTGGAGAAC TCATAAAGAC CTTGAGAGAG GGTGTGCCCG GTATAGAGAA TGTCGATCTT
TCTGTGCACT GTCACAACGA TCTTGGACTC GCTGTGGCGA ACTCCCTCGC TGCCGTTCAG
AACGGAGCCA CCCAGGTCGA AGTGACTCTG AACGGTATCG GAGAGAGGGC AGGAAACTGT
GCCCTGGAAG AGTTCGTGAT GATCCTCAAG GTGAGGAAAG ACAAACTTCC CTACGAGACG
GGTATAAAGA CAGAGCTCAT ATACCCCGCT TCCAGGCTCC TCACACATAT AACGGGGCTC
ATCCCGTCCA GAAACAAACC CATAGTGGGA GAGAACGTGT TCCTTCACGA GTCGGGTATA
CACCAGGATG GTGTGCTGAA ACACAGGGAG ACCTACGAGA TCATGAAACC ATCCGATATC
GGCAGGTCTT CCGAGACGCT CGTGCTTGGA AGACACTCCG GAAAGCACGC CCTCAGAAAG
AAGCTGGAGA GCTACGGCAT CAAACTCGAC GAAGAGACCT TCCAGAAAGT GTTCGAGAAG
TTCACAGAAC TCGCCGACAG AAAGAAAGAG GTTTACGACG ATGATCTTTT CTCGATCGTC
TCGGAAGTTT TGAGGGAGCC CATCAACGGT TACAAGCTCG TTCACTTCCA TGTACACACC
GGAAACACGC TGCTTCCAAC CGCGGCGGTC GTGCTTCAGG TTGGAGATGA AAAGAAAGAA
GCAGCAGAGG CAGGAAACGG TCCAGTGGAT GCTATCTTCA AGGCTATAGA CAAAGCGCTC
GGTATTCAAC CGAAGCTCGA GGAGTACATA ATTCAGGCGG TTGGAACTGG AAAGAACGCA
CAGGGAGAGG TCAAACTCAC GTTGAGAATA AACGGTGAAC TCTACAGTGG AAGGGGTGTC
TCCACGGACA TAGTGGAAGC CTCTGCGATA GCTTACATAA ACGCAATAAA CAAGTACCTC
ATCGCTAAAG GCCTTCTCAG AAAAAACGGG GGTGCTGAGT GA
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| Protein sequence | MRRIKIFDTT LRDGEQSPGA SMSVEEKVEM ALMLEDLGVD LIEAGFPVSS PVQFEAVKRV
ASAVQKPIVV GLARCVEKDI DAVYEALKDR PKDKRMIHVF IATSPIHRKY KLRMEKEEIL
ERIRRYVGYA KQFFDLVEFS AEDASRTEVP FLIEAYKTAI EAGATTINVP DTVGYALPDE
FGELIKTLRE GVPGIENVDL SVHCHNDLGL AVANSLAAVQ NGATQVEVTL NGIGERAGNC
ALEEFVMILK VRKDKLPYET GIKTELIYPA SRLLTHITGL IPSRNKPIVG ENVFLHESGI
HQDGVLKHRE TYEIMKPSDI GRSSETLVLG RHSGKHALRK KLESYGIKLD EETFQKVFEK
FTELADRKKE VYDDDLFSIV SEVLREPING YKLVHFHVHT GNTLLPTAAV VLQVGDEKKE
AAEAGNGPVD AIFKAIDKAL GIQPKLEEYI IQAVGTGKNA QGEVKLTLRI NGELYSGRGV
STDIVEASAI AYINAINKYL IAKGLLRKNG GAE
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