| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0323 |
|---|
| Symbol | |
|---|
| ID | 5171508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 304298 |
|---|
| End bp | 305614 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640562826 |
|---|
| Product | xanthine/uracil/vitamin C permease |
|---|
| Protein accession | YP_001243928 |
|---|
| Protein GI | 148269468 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2252] Permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCCGTC TCAAAGAGAA CGGGACGAAC GTGAAAACGG AGATCTTCGC GGGTATCGCC
ACTTTCCTCA CCATGGCCTA CATCGTTTTT GTGAATCCTT CCATCCTCGT TCAGGCGGTT
GGTGTGGACG CGAGCAGCCC CCTGTACCAG CAGTTCTTCG GAGCATTCAT GGTCGCAACG
ATACTGGGAT CCGCCACAGC CACTCTCGTC ATGGCCTTCT TCGCGAACTA TCCTTTCGCA
CTCGCACCCG GTATGGGACT GAACGCGTAC TTCACCTACA CTGTGTGCCT CGGCATGGGG
ATAGACTGGA GAGTGGCCCT CGCTGCCGTG TTCGTTGAAG GTCTGATCTT CATAGGCTTG
ACACTCGTTG GGTTCAGAAA GTTCGTCGCC GGGATCATAC CCGAGTCCAT AAAAGTGGCC
ATCTCCGCGG GTATCGGTTT CTTCATCGCC TTCATAGGGT TGAGGAGTGC GGGAATCGTT
GTTTCCAATC CCGCCACTTC CGTTGCCCTC GGTGATCTCA CGAATCCCGG TGTATTCGTG
ACGGTCGTGG GGCTCCTGGT GATCGTGGCG CTCTACCACA GGAAGATCCC GGGAGCGGTG
ATGATAGGGA TTCTCGTGGC CACACTCGTA GGTGCCATCC CCGGCATAGG AGTCACGAAG
TACCAGGGAA TCGTCGGTCC TGTTCCAGAT ATATCTCCGA CGTTCATGAA GCTCGACTTT
TCTGGATTTT TGAGCCTTGA CTTCTGGATC GTTGTTCTCA CTTTCTTCTT CGTCGACTTC
TTCGACACAC TCGGTACCAT CACAGGACTC GCTCAGAGCG CTGGTTTCAT GAAGAACGGA
GAGCTTCCGA GGGCGAACAG GGCGTTCCTC GCGGACGCGA TAGGAACTTC CGTGGGTGCA
CTCTTTGGAA CTTCGACGGT GACCACGTAC ATCGAGAGCG GTGCGGGTAT CGCAGAAGGA
GGAAGAACTG GCCTCACGGC CCTCGTCGTT GCACTCTGTA TGCTCGCCAT GCTCTTCTTC
GCCCCTCTCG CCCAGACGGT TCCTGGATAC GCGACCGCTC CCGCTCTGAT CTTCGTTGGT
GCGCTCATGA TCGGAAACCT TGGAAGAGTG AAATGGGACG ACATCACAGA AGCGCTCCCT
GCGTTCATCA CCGTTATAAC TATGCCACTC ACATACTCCA TAGCCAATGG AATAGCGCTC
GGTATCATTT CTTATGCACT GGTGAAGTTC TTCTCCGGGA AATCGAAAGA AGTACACTGG
TTCACGTGGA TTCTCGCTCT CGCCTTCGCT CTGTGGCTGC TCTTCATAAA GCATTGA
|
|---|
| Protein sequence | MFRLKENGTN VKTEIFAGIA TFLTMAYIVF VNPSILVQAV GVDASSPLYQ QFFGAFMVAT
ILGSATATLV MAFFANYPFA LAPGMGLNAY FTYTVCLGMG IDWRVALAAV FVEGLIFIGL
TLVGFRKFVA GIIPESIKVA ISAGIGFFIA FIGLRSAGIV VSNPATSVAL GDLTNPGVFV
TVVGLLVIVA LYHRKIPGAV MIGILVATLV GAIPGIGVTK YQGIVGPVPD ISPTFMKLDF
SGFLSLDFWI VVLTFFFVDF FDTLGTITGL AQSAGFMKNG ELPRANRAFL ADAIGTSVGA
LFGTSTVTTY IESGAGIAEG GRTGLTALVV ALCMLAMLFF APLAQTVPGY ATAPALIFVG
ALMIGNLGRV KWDDITEALP AFITVITMPL TYSIANGIAL GIISYALVKF FSGKSKEVHW
FTWILALAFA LWLLFIKH
|
|---|
| |