Gene Tpet_0314 details

Gene Information

• Locus tag: Tpet_0314
• ID: 5170987
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: -
• Start bp: 294718
• End bp: 295143
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640562817
• Product: single-strand binding protein
• Protein accession: YP_001243919
• Protein GI: 148269459
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000000013308
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTTCT TCAACAAGAT CATACTCATA GGAAGACTCG TGAGAGATCC TGAAAAGAGA 
TACACGCTCA GCGGAACTCC CGTCACCACC TTCACGATAG CGGTGGACAG GGTTCCCAGA 
AAGAACGCGC CGGACGATGC TCAGACAACG GATTTCTTCA ATGTTGTTAC CTTTGGAAGA 
CTCGCAGAAT TCACGGGAAC CTATCTCACC AAGGGAAGGC TTGTTCTCAT CGAAGGTGAA 
ATGAGAATGA GAAGATGGGA AACACCGTCT GGAGAAAAAA GGGTATCTCC GGAGGTTGTC 
GCAAACGTTG TTAGATTCAT GGACAGAAAA CCTGCTGAAA CGGTCAACGA GACTGAAGAG 
GAACTGGAGA TACCGGAGGA AGACTTTTCC AGCGATACTT TCAGTGAAGA TGAACCACCA 
TTTTGA 

 

Protein sequence

MSFFNKIILI GRLVRDPEKR YTLSGTPVTT FTIAVDRVPR KNAPDDAQTT DFFNVVTFGR 
LAEFTGTYLT KGRLVLIEGE MRMRRWETPS GEKRVSPEVV ANVVRFMDRK PAETVNETEE 
ELEIPEEDFS SDTFSEDEPP F